RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 C20orf194Q5TEA3 1177 aa27.05■■□□□ 1.92
HPS3-207ENST00000494327 DEFB129Q9H1M3 183 aa27.05■■□□□ 1.92
HPS3-207ENST00000494327 MOB2Q70IA6 237 aa27.04■■□□□ 1.92
HPS3-207ENST00000494327 TEKT1Q969V4 418 aa27.04■■□□□ 1.92
HPS3-207ENST00000494327 SUGT1Q9Y2Z0 365 aa27.04■■□□□ 1.92
HPS3-207ENST00000494327 COL1A1P02452 1464 aaPredicted RBP27.04■■□□□ 1.92
HPS3-207ENST00000494327 SEMA3EO15041 775 aa27.03■■□□□ 1.92
HPS3-207ENST00000494327 PRKG1Q13976 671 aa27.03■■□□□ 1.92
HPS3-207ENST00000494327 RGMBQ6NW40 437 aa27.03■■□□□ 1.92
HPS3-207ENST00000494327 ZNF70Q9UC06 446 aaPredicted RBP27.03■■□□□ 1.92
HPS3-207ENST00000494327 MAST3O60307 1309 aa27.02■■□□□ 1.92
HPS3-207ENST00000494327 ZNF157P51786 506 aaPredicted RBP27.02■■□□□ 1.92
HPS3-207ENST00000494327 HDLBPQ00341 1268 aaKnown RBP27.02■■□□□ 1.92
HPS3-207ENST00000494327 UBE2Q2LH0YL09 131 aa27.01■■□□□ 1.91
HPS3-207ENST00000494327 FKBP1BP68106 108 aa27.01■■□□□ 1.91
HPS3-207ENST00000494327 RASGRF1Q13972 1273 aa27.01■■□□□ 1.91
HPS3-207ENST00000494327 SPDYE2Q495Y8 402 aa27.01■■□□□ 1.91
HPS3-207ENST00000494327 NOP58Q9Y2X3 529 aaKnown RBP27.01■■□□□ 1.91
HPS3-207ENST00000494327 LDHBP07195 334 aaKnown RBP27■■□□□ 1.91
HPS3-207ENST00000494327 PRDX5P30044 214 aa27■■□□□ 1.91
HPS3-207ENST00000494327 PDE3AQ14432 1141 aa27■■□□□ 1.91
HPS3-207ENST00000494327 AIDAQ96BJ3 306 aa27■■□□□ 1.91
HPS3-207ENST00000494327 CHMP4BQ9H444 224 aaKnown RBP27■■□□□ 1.91
HPS3-207ENST00000494327 ZBTB40Q9NUA8 1239 aa27■■□□□ 1.91
HPS3-207ENST00000494327 ARAP2Q8WZ64 1704 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 TCP10L2B9ZVM9 353 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 MAP2K1Q02750 393 aaPredicted RBP26.99■■□□□ 1.91
HPS3-207ENST00000494327 RASA3Q14644 834 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 TNNI3KQ59H18 835 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 MRIQ9BWK5 157 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 WBP1LQ9NX94 342 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 PPP2R3BQ9Y5P8 575 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 FPGT-TNNI3KV9GXZ4 949 aa26.99■■□□□ 1.91
HPS3-207ENST00000494327 MAP2K2P36507 400 aa26.98■■□□□ 1.91
HPS3-207ENST00000494327 ZDHHC15Q96MV8 337 aa26.98■■□□□ 1.91
HPS3-207ENST00000494327 ABCF2Q9UG63 623 aa26.98■■□□□ 1.91
HPS3-207ENST00000494327 EXOC6BQ9Y2D4 811 aa26.98■■□□□ 1.91
HPS3-207ENST00000494327 SALL1Q9NSC2 1324 aa26.97■■□□□ 1.91
HPS3-207ENST00000494327 FOXN1O15353 648 aa26.97■■□□□ 1.91
HPS3-207ENST00000494327 TNFAIP1Q13829 316 aa26.97■■□□□ 1.91
HPS3-207ENST00000494327 HHIPL2Q6UWX4 724 aa26.97■■□□□ 1.91
HPS3-207ENST00000494327 CCDC102AQ96A19 550 aa26.97■■□□□ 1.91
HPS3-207ENST00000494327 GPR108Q9NPR9 543 aa26.97■■□□□ 1.91
HPS3-207ENST00000494327 FZD1Q9UP38 647 aa26.97■■□□□ 1.91
HPS3-207ENST00000494327 CACNB3P54284 484 aa26.96■■□□□ 1.91
HPS3-207ENST00000494327 NOGQ13253 232 aa26.96■■□□□ 1.91
HPS3-207ENST00000494327 DIXDC1Q155Q3 683 aa26.96■■□□□ 1.91
HPS3-207ENST00000494327 APOBEC3HQ6NTF7 200 aaKnown RBP26.96■■□□□ 1.91
HPS3-207ENST00000494327 ARMC9Q7Z3E5 817 aa26.96■■□□□ 1.91
HPS3-207ENST00000494327 RPAP2Q8IXW5 612 aaPredicted RBP26.96■■□□□ 1.91
HPS3-207ENST00000494327 ZGPATQ8N5A5 531 aaKnown RBP26.96■■□□□ 1.91
HPS3-207ENST00000494327 ZIC5Q96T25 663 aa26.96■■□□□ 1.91
HPS3-207ENST00000494327 SUPT20HL1Q3ZLR7 823 aa26.95■■□□□ 1.9
HPS3-207ENST00000494327 NBPF12Q5TAG4 269 aaPredicted RBP26.95■■□□□ 1.9
HPS3-207ENST00000494327 DBNDD2Q9BQY9 259 aa26.95■■□□□ 1.9
HPS3-207ENST00000494327 BEGAINQ9BUH8 593 aa26.95■■□□□ 1.9
HPS3-207ENST00000494327 TMOD2Q9NZR1 351 aa26.95■■□□□ 1.9
HPS3-207ENST00000494327 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.95■■□□□ 1.9
HPS3-207ENST00000494327 ANGEL1Q9UNK9 670 aaKnown RBP26.95■■□□□ 1.9
HPS3-207ENST00000494327 MYH13Q9UKX3 1938 aa26.94■■□□□ 1.9
HPS3-207ENST00000494327 FAM155AB1AL88 458 aaPredicted RBP26.94■■□□□ 1.9
HPS3-207ENST00000494327 TNNI2P48788 182 aa26.94■■□□□ 1.9
HPS3-207ENST00000494327 PI16Q6UXB8 463 aa26.94■■□□□ 1.9
HPS3-207ENST00000494327 SPATA5Q8NB90 893 aa26.94■■□□□ 1.9
HPS3-207ENST00000494327 HMG20BQ9P0W2 317 aa26.94■■□□□ 1.9
HPS3-207ENST00000494327 PAPPA2Q9BXP8 1791 aa26.94■■□□□ 1.9
HPS3-207ENST00000494327 ZBTB22O15209 634 aa26.93■■□□□ 1.9
HPS3-207ENST00000494327 UQCRFS1P1P0C7P4 283 aa26.93■■□□□ 1.9
HPS3-207ENST00000494327 CCDC158Q5M9N0 1113 aa26.93■■□□□ 1.9
HPS3-207ENST00000494327 TTC39AQ5SRH9 613 aa26.93■■□□□ 1.9
HPS3-207ENST00000494327 DZIP1Q86YF9 867 aaKnown RBP26.93■■□□□ 1.9
HPS3-207ENST00000494327 CCDC8Q9H0W5 538 aaPredicted RBP26.93■■□□□ 1.9
HPS3-207ENST00000494327 DAGLAQ9Y4D2 1042 aa26.93■■□□□ 1.9
HPS3-207ENST00000494327 ECM29Q5VYK3 1845 aa26.93■■□□□ 1.9
HPS3-207ENST00000494327 PDS5AQ29RF7 1337 aaKnown RBP26.92■■□□□ 1.9
HPS3-207ENST00000494327 APBB1O00213 710 aa26.92■■□□□ 1.9
HPS3-207ENST00000494327 PPP1R12BO60237 982 aaPredicted RBP26.92■■□□□ 1.9
HPS3-207ENST00000494327 HMMRO75330 724 aa26.92■■□□□ 1.9
HPS3-207ENST00000494327 SLC10A3P09131 477 aa26.92■■□□□ 1.9
HPS3-207ENST00000494327 ARID4AP29374 1257 aaPredicted RBP26.92■■□□□ 1.9
HPS3-207ENST00000494327 SPTY2D1Q68D10 685 aaPredicted RBP26.92■■□□□ 1.9
HPS3-207ENST00000494327 ERC1Q8IUD2 1116 aa26.92■■□□□ 1.9
HPS3-207ENST00000494327 SIRT2Q8IXJ6 389 aa26.92■■□□□ 1.9
HPS3-207ENST00000494327 TMEM39BQ9GZU3 492 aa26.92■■□□□ 1.9
HPS3-207ENST00000494327 KIF23Q02241 960 aaPredicted RBP26.91■■□□□ 1.9
HPS3-207ENST00000494327 HSP90AB4PQ58FF6 505 aa26.91■■□□□ 1.9
HPS3-207ENST00000494327 TBC1D9Q6ZT07 1266 aa26.91■■□□□ 1.9
HPS3-207ENST00000494327 RASAL3Q86YV0 1011 aa26.91■■□□□ 1.9
HPS3-207ENST00000494327 PCNTO95613 3336 aa26.91■■□□□ 1.9
HPS3-207ENST00000494327 MCAMP43121 646 aa26.9■■□□□ 1.9
HPS3-207ENST00000494327 CTCFP49711 727 aaPredicted RBP26.9■■□□□ 1.9
HPS3-207ENST00000494327 ERICH6Q7L0X2 663 aa26.9■■□□□ 1.9
HPS3-207ENST00000494327 EAF2Q96CJ1 260 aaPredicted RBP26.9■■□□□ 1.9
HPS3-207ENST00000494327 BCL11AQ9H165 835 aa26.9■■□□□ 1.9
HPS3-207ENST00000494327 SNRKQ9NRH2 765 aa26.9■■□□□ 1.9
HPS3-207ENST00000494327 TLR7Q9NYK1 1049 aaKnown RBP26.9■■□□□ 1.9
HPS3-207ENST00000494327 COL13A1Q5TAT6 717 aaPredicted RBP26.89■■□□□ 1.9
HPS3-207ENST00000494327 CDAN1Q8IWY9 1227 aa26.89■■□□□ 1.9
HPS3-207ENST00000494327 DBNLQ9UJU6 430 aaKnown RBP26.89■■□□□ 1.9
HPS3-207ENST00000494327 SSC5DA1L4H1 1573 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms