RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 RAD18Q9NS91 495 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 PARP2Q9UGN5 583 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 TTF2Q9UNY4 1162 aaKnown RBP3.99□□□□□ -1.77
LMNB1-207ENST00000494185 AKAP2Q9Y2D5 859 aa3.99□□□□□ -1.77
LMNB1-207ENST00000494185 METTL12A8MUP2 240 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 C1QTNF9BB2RNN3 333 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 DHX15O43143 795 aaKnown RBP3.98□□□□□ -1.77
LMNB1-207ENST00000494185 ESRRAP11474 423 aaPredicted RBP3.98□□□□□ -1.77
LMNB1-207ENST00000494185 BAG6P46379 1132 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 GRIA4P48058 902 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 NLRP12P59046 1061 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 DAB2P98082 770 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 PWP1Q13610 501 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 POU4F3Q15319 338 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 GRIK4Q16099 956 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 NXPE4Q6UWF7 544 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 TMC4Q7Z404 712 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 GLIS3Q8NEA6 775 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 ANKRD24Q8TF21 1146 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 ACSBG1Q96GR2 724 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 CARD10Q9BWT7 1032 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 VTI1BQ9UEU0 232 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 AK5Q9Y6K8 562 aa3.98□□□□□ -1.77
LMNB1-207ENST00000494185 KRBA1A5PL33 1030 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 F8W735 103 aaPredicted RBP3.97□□□□□ -1.77
LMNB1-207ENST00000494185 DEAF1O75398 565 aaPredicted RBP3.97□□□□□ -1.77
LMNB1-207ENST00000494185 COL9A3Q14050 684 aaPredicted RBP3.97□□□□□ -1.77
LMNB1-207ENST00000494185 EXOSC6Q5RKV6 272 aaKnown RBP3.97□□□□□ -1.77
LMNB1-207ENST00000494185 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.97□□□□□ -1.77
LMNB1-207ENST00000494185 VN1R5Q7Z5H4 357 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 NPM2Q86SE8 214 aaKnown RBP3.97□□□□□ -1.77
LMNB1-207ENST00000494185 CD163Q86VB7 1156 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 WFDC12Q8WWY7 111 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 UTP4Q969X6 686 aaKnown RBP3.97□□□□□ -1.77
LMNB1-207ENST00000494185 CRELD1Q96HD1 420 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 FAM161BQ96MY7 647 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 OSBPL7Q9BZF2 842 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 PICK1Q9NRD5 415 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 KRT82Q9NSB4 513 aa3.97□□□□□ -1.77
LMNB1-207ENST00000494185 SYNGAP1Q96PV0 1343 aa3.96□□□□□ -1.77
LMNB1-207ENST00000494185 MEGF11A6BM72 1044 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 USP17L7P0C7H9 530 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 SELPP16109 830 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 NME2P22392 152 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 CHRNA4P43681 627 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 USP11P51784 963 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 SPRED3Q2MJR0 410 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 ADAMTSL4Q6UY14 1074 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 SV2BQ7L1I2 683 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 TP53INP1Q96A56 240 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 KLHDC7BQ96G42 594 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 SPOCK3Q9BQ16 436 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 SUGCTQ9HAC7 445 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 PIDD1Q9HB75 910 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 CBX8Q9HC52 389 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 RNF19AQ9NV58 838 aa3.96□□□□□ -1.78
LMNB1-207ENST00000494185 SOX1O00570 391 aaPredicted RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 H2AFB1P0C5Y9 115 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 H2AFB2P0C5Z0 115 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 IREB2P48200 963 aaKnown RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 ST13P50502 369 aaKnown RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 MAP7Q14244 749 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 CCDC85BQ15834 202 aaPredicted RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 CPSF6Q16630 551 aaKnown RBP eCLIP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 FOXD4L6Q3SYB3 417 aaPredicted RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 SHISA2Q6UWI4 295 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 FOXD4L3Q6VB84 417 aaPredicted RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 SULF2Q8IWU5 870 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 C12orf50Q8NA57 414 aaPredicted RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 C3orf58Q8NDZ4 430 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 NOC4LQ9BVI4 516 aaKnown RBP3.95□□□□□ -1.78
LMNB1-207ENST00000494185 ATXN3LQ9H3M9 355 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 CYP8B1Q9UNU6 501 aa3.95□□□□□ -1.78
LMNB1-207ENST00000494185 LOC100289279A0A1B0GTE1 492 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 GSTP1P09211 210 aaKnown RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 MAOBP27338 520 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 RXRBP28702 533 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 RBM25P49756 843 aaKnown RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 MRPL58Q14197 206 aaKnown RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 TAF1CQ15572 869 aaPredicted RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 LLGL2Q6P1M3 1020 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 PAOXQ6QHF9 649 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 TPTE2Q6XPS3 522 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 Q6ZS46 218 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 ILDR2Q71H61 639 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 KCT2Q8NC54 265 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 GALNT11Q8NCW6 608 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 SMG8Q8ND04 991 aaKnown RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 KCNB2Q92953 911 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 MRRFQ96E11 262 aaKnown RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 METTL22Q9BUU2 404 aaPredicted RBP3.94□□□□□ -1.78
LMNB1-207ENST00000494185 KCNF1Q9H3M0 494 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 STOML1Q9UBI4 398 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 AP4E1Q9UPM8 1137 aa3.94□□□□□ -1.78
LMNB1-207ENST00000494185 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.93□□□□□ -1.78
LMNB1-207ENST00000494185 K7ELQ4 463 aaPredicted RBP3.93□□□□□ -1.78
LMNB1-207ENST00000494185 TRIM37O94972 964 aa3.93□□□□□ -1.78
LMNB1-207ENST00000494185 BPNT1O95861 308 aa3.93□□□□□ -1.78
LMNB1-207ENST00000494185 VAMP1P23763 118 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms