RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 SUGT1Q9Y2Z0 365 aa12.37□□□□□ -0.43
RFC2-211ENST00000494019 IGHDP01880 384 aa12.36□□□□□ -0.43
RFC2-211ENST00000494019 LDHBP07195 334 aaKnown RBP12.36□□□□□ -0.43
RFC2-211ENST00000494019 FSTL1Q12841 308 aa12.36□□□□□ -0.43
RFC2-211ENST00000494019 DLGAP5Q15398 846 aa12.36□□□□□ -0.43
RFC2-211ENST00000494019 CFAP100Q494V2 611 aa12.36□□□□□ -0.43
RFC2-211ENST00000494019 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
RFC2-211ENST00000494019 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
RFC2-211ENST00000494019 ASTN2O75129 1339 aaPredicted RBP12.36□□□□□ -0.43
RFC2-211ENST00000494019 WNT10BO00744 389 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 ZAP70P43403 619 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 CRKP46108 304 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 C1QTNF8P60827 252 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 NBPF9Q3BBW0 867 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 ANKRD45Q5TZF3 282 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 ANGEL2Q5VTE6 544 aaKnown RBP12.35□□□□□ -0.43
RFC2-211ENST00000494019 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 SMC5Q8IY18 1101 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 ZC3H15Q8WU90 426 aaKnown RBP12.35□□□□□ -0.43
RFC2-211ENST00000494019 TEKT1Q969V4 418 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 DCPSQ96C86 337 aaKnown RBP12.35□□□□□ -0.43
RFC2-211ENST00000494019 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
RFC2-211ENST00000494019 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 MYO1BO43795 1136 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
RFC2-211ENST00000494019 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 ZBED3Q96IU2 234 aaPredicted RBP12.34□□□□□ -0.43
RFC2-211ENST00000494019 DNAJC2Q99543 621 aaKnown RBP12.34□□□□□ -0.43
RFC2-211ENST00000494019 GLIS2Q9BZE0 524 aaPredicted RBP12.34□□□□□ -0.43
RFC2-211ENST00000494019 LRP2BPQ9P2M1 347 aa12.34□□□□□ -0.43
RFC2-211ENST00000494019 CYP2E1P05181 493 aaPredicted RBP12.33□□□□□ -0.44
RFC2-211ENST00000494019 HDLBPQ00341 1268 aaKnown RBP12.33□□□□□ -0.44
RFC2-211ENST00000494019 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
RFC2-211ENST00000494019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.33□□□□□ -0.44
RFC2-211ENST00000494019 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
RFC2-211ENST00000494019 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
RFC2-211ENST00000494019 PGAP2Q9UHJ9 254 aa12.33□□□□□ -0.44
RFC2-211ENST00000494019 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.44
RFC2-211ENST00000494019 AOX1Q06278 1338 aa12.33□□□□□ -0.44
RFC2-211ENST00000494019 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.44
RFC2-211ENST00000494019 OTOFQ9HC10 1997 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 CLRN2A0PK11 232 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 ADM5C9JUS6 153 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 ATP5JP18859 108 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 MX1P20591 662 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 MECOMQ03112 1051 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 SULF1Q8IWU6 871 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 OTUD7AQ8TE49 926 aaPredicted RBP12.32□□□□□ -0.44
RFC2-211ENST00000494019 PRMT6Q96LA8 375 aaPredicted RBP12.32□□□□□ -0.44
RFC2-211ENST00000494019 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 BOLA2Q9H3K6 86 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 ANTXR1Q9H6X2 564 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 VEZTQ9HBM0 779 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
RFC2-211ENST00000494019 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
RFC2-211ENST00000494019 DAGLAQ9Y4D2 1042 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 MYH1P12882 1939 aa12.32□□□□□ -0.44
RFC2-211ENST00000494019 GOLIM4O00461 696 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 TRAF5O00463 557 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 IDH1O75874 414 aaKnown RBP12.31□□□□□ -0.44
RFC2-211ENST00000494019 ITGBL1O95965 494 aaPredicted RBP12.31□□□□□ -0.44
RFC2-211ENST00000494019 TTF1Q15361 905 aaPredicted RBP12.31□□□□□ -0.44
RFC2-211ENST00000494019 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 APOBEC3FQ8IUX4 373 aaKnown RBP12.31□□□□□ -0.44
RFC2-211ENST00000494019 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 NSUN4Q96CB9 384 aaKnown RBP12.31□□□□□ -0.44
RFC2-211ENST00000494019 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
RFC2-211ENST00000494019 MROH7-TTC4A0A0A0MT08 1334 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 GAKO14976 1311 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 PASKQ96RG2 1323 aa12.31□□□□□ -0.44
RFC2-211ENST00000494019 PAPPA2Q9BXP8 1791 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 GSTO1P78417 241 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 NUCB1Q02818 461 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
RFC2-211ENST00000494019 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 NAA16Q6N069 864 aaPredicted RBP12.3□□□□□ -0.44
RFC2-211ENST00000494019 USP48Q86UV5 1035 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
RFC2-211ENST00000494019 HAUS7Q99871 368 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 MRIQ9BWK5 157 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 PAG1Q9NWQ8 432 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
RFC2-211ENST00000494019 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
RFC2-211ENST00000494019 MYH8P13535 1937 aa12.29□□□□□ -0.44
RFC2-211ENST00000494019 DDX60LQ5H9U9 1706 aaKnown RBP12.29□□□□□ -0.44
RFC2-211ENST00000494019 ERC2O15083 957 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms