RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 ANKRD13AQ8IZ07 590 aa12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 DOCK2Q92608 1830 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 MYH2Q9UKX2 1941 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 E9PSI1 815 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 PDE8BO95263 885 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 CRKP46108 304 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 TNNI2P48788 182 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 CHAF1AQ13111 956 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
NUDCD3-210ENST00000493613 BRCA2P51587 3418 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 GJA5P36382 358 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 GRIK5Q16478 980 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 VGLL2Q8N8G2 317 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 TBC1D22AQ8WUA7 517 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 ZSWIM8A7E2V4 1837 aa12.89□□□□□ -0.35
NUDCD3-210ENST00000493613 SLC34A2O95436 690 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 CDAN1Q8IWY9 1227 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 OPTNQ96CV9 577 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 TEPSINQ96N21 525 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 TMEM39BQ9GZU3 492 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 ELP3Q9H9T3 547 aa12.88□□□□□ -0.35
NUDCD3-210ENST00000493613 BCAMP50895 628 aa12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 HDLBPQ00341 1268 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 CRHR2Q13324 411 aa12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 PUM3Q15397 648 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 MAST3O60307 1309 aa12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
NUDCD3-210ENST00000493613 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 IFIT1P09914 478 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 CACNB3P54284 484 aa12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 VGLL4Q14135 290 aa12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 OTOP1Q7RTM1 612 aa12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 ERO1AQ96HE7 468 aa12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 PTPN18Q99952 460 aa12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
NUDCD3-210ENST00000493613 MGAMO43451 1857 aa12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 FGFR2P21802 821 aa12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 ZDHHC15Q96MV8 337 aa12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 TMOD2Q9NZR1 351 aa12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 CSADQ9Y600 493 aa12.85□□□□□ -0.35
NUDCD3-210ENST00000493613 EYA2O00167 538 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 SLC5A1P13866 664 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 MS4A4AQ96JQ5 239 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 PTPRFP10586 1907 aa12.84□□□□□ -0.35
NUDCD3-210ENST00000493613 CCL15-CCL14A0A0B4J2E2 113 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 GTF2A2P52657 109 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 SP3Q02447 781 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 CCL15Q16663 113 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 FAM83AQ86UY5 434 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 WDR66Q8TBY9 1149 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 LPIN2Q92539 896 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 SIL1Q9H173 461 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 PTPN22Q9Y2R2 807 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.36
NUDCD3-210ENST00000493613 DOCK1Q14185 1865 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 SPDYE5A6NIY4 337 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 TAF1CQ15572 869 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 PRPF38BQ5VTL8 546 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 FKBP1CQ5VVH2 108 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 BRI3BPQ8WY22 251 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 WRNIP1Q96S55 665 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 EFCC1Q9HA90 598 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
NUDCD3-210ENST00000493613 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
NUDCD3-210ENST00000493613 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
NUDCD3-210ENST00000493613 DCAF15Q66K64 600 aa12.81□□□□□ -0.36
NUDCD3-210ENST00000493613 ERO1BQ86YB8 467 aa12.81□□□□□ -0.36
NUDCD3-210ENST00000493613 TRMT2AQ8IZ69 625 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-210ENST00000493613 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms