RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 BEND3Q5T5X7 828 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 CEP85Q6P2H3 762 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 COPS6Q7L5N1 327 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 TPCN2Q8NHX9 752 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 FOXJ1Q92949 421 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 HINFPQ9BQA5 517 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 C9orf78Q9NZ63 289 aaPredicted RBP8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 TRPC5Q9UL62 973 aaPredicted RBP8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 ASAP1Q9ULH1 1129 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 USP16Q9Y5T5 823 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 ATRNO75882 1429 aa8.34□□□□□ -1.07
NCKAP1-207ENST00000493359 ABL1P00519 1130 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 PPP1R18Q6NYC8 613 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 KIF6Q6ZMV9 814 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 ZNF511Q8NB15 262 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 LINS1Q8NG48 757 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 C1orf216Q8TAB5 229 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 SMARCC1Q92922 1105 aaPredicted RBP8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 MYD88Q99836 296 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 PCDHB11Q9Y5F2 797 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
NCKAP1-207ENST00000493359 SFI1A8K8P3 1242 aa8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 PIP4K2AP48426 406 aaPredicted RBP8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 MARSP56192 900 aaKnown RBP8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 NUCB1Q02818 461 aa8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 ANKRD45Q5TZF3 282 aa8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 DNAJC10Q8IXB1 793 aa8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 PLBD2Q8NHP8 589 aa8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 METTL22Q9BUU2 404 aaPredicted RBP8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 LRRFIP2Q9Y608 721 aaKnown RBP8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 PALLDQ8WX93 1383 aa8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 TJP1Q07157 1748 aa8.32□□□□□ -1.08
NCKAP1-207ENST00000493359 NHSQ6T4R5 1651 aa8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 GRM8O00222 908 aa8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 A1BGP04217 495 aa8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 SCNN1AP37088 669 aa8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 CWF19L2Q2TBE0 894 aaKnown RBP8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 CHD1LQ86WJ1 897 aa8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 SKAP1Q86WV1 359 aa8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 CDV3Q9UKY7 258 aaKnown RBP8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 FCF1Q9Y324 198 aaKnown RBP8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 CICQ96RK0 1608 aaPredicted RBP8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 IBTKQ9P2D0 1353 aaPredicted RBP8.31□□□□□ -1.08
NCKAP1-207ENST00000493359 NUP188Q5SRE5 1749 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 RBM47A0AV96 593 aaKnown RBP8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 MYCP01106 439 aaPredicted RBP8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 RAB15P59190 212 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 NBPF10Q6P3W6 841 aaKnown RBP8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 CCDC125Q86Z20 511 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 SIRT2Q8IXJ6 389 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 SEPT12Q8IYM1 358 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 LNPKQ9C0E8 428 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 DCTPP1Q9H773 170 aa8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 CXXC1Q9P0U4 656 aaPredicted RBP8.3□□□□□ -1.08
NCKAP1-207ENST00000493359 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 DKK1O94907 266 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 S1PR4O95977 384 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 CYP19A1P11511 503 aaPredicted RBP8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 ATP8B2P98198 1209 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 HSP90AB4PQ58FF6 505 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 TTLL7Q6ZT98 887 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 LRP10Q7Z4F1 713 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 QTRT2Q9H974 415 aaKnown RBP8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
NCKAP1-207ENST00000493359 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 H3BRB1 525 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 ZBTB24O43167 697 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 SRGAP3O43295 1099 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 LGR5O75473 907 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 IGKV5-2P06315 115 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 NBPF7P0C2Y1 421 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 SIK1P57059 783 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 OS9Q13438 667 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 GCKRQ14397 625 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 HSP90AB3PQ58FF7 597 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 ZNF772Q68DY9 489 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 DNAJC14Q6Y2X3 702 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 GLYCTKQ8IVS8 523 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 TUT1Q9H6E5 874 aaKnown RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 CWC25Q9NXE8 425 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 UTYO14607 1347 aa8.28□□□□□ -1.08
NCKAP1-207ENST00000493359 ZNF831Q5JPB2 1677 aa8.27□□□□□ -1.08
NCKAP1-207ENST00000493359 A0A087WZG4 1122 aa8.27□□□□□ -1.09
NCKAP1-207ENST00000493359 PNMA6EA0A0J9YXQ4 647 aa8.27□□□□□ -1.09
NCKAP1-207ENST00000493359 ESPNB1AK53 854 aa8.27□□□□□ -1.09
NCKAP1-207ENST00000493359 PPEF1O14829 653 aaPredicted RBP8.27□□□□□ -1.09
NCKAP1-207ENST00000493359 KCNQ2O43526 872 aa8.27□□□□□ -1.09
NCKAP1-207ENST00000493359 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms