RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 LETM2Q2VYF4 491 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 NBPF14Q5TI25 921 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 SNX21Q969T3 373 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 GJA3Q9Y6H8 435 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 UFL1O94874 794 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 GPCPD1Q9NPB8 672 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 MAP3K19Q56UN5 1328 aa15.4■□□□□ 0.06
TRIM11-204ENST00000493030 ZNF174Q15697 407 aa15.39■□□□□ 0.06
TRIM11-204ENST00000493030 CCDC129Q6ZRS4 1044 aa15.39■□□□□ 0.06
TRIM11-204ENST00000493030 PPM1EQ8WY54 764 aa15.39■□□□□ 0.06
TRIM11-204ENST00000493030 PRIMPOLQ96LW4 560 aa15.39■□□□□ 0.06
TRIM11-204ENST00000493030 DENND2AQ9ULE3 1009 aa15.39■□□□□ 0.06
TRIM11-204ENST00000493030 GUCA1BQ9UMX6 200 aa15.39■□□□□ 0.06
TRIM11-204ENST00000493030 DUOX2Q9NRD8 1548 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 CTAGE9A4FU28 777 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 KRT86O43790 486 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 ITGA6P23229 1130 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 EIF6P56537 245 aaKnown RBP15.39■□□□□ 0.05
TRIM11-204ENST00000493030 LMBR1Q8WVP7 490 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 IP6K1Q92551 441 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRIM11-204ENST00000493030 ABCC1P33527 1531 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 A0A1B0GUL7 405 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 DCAF17Q5H9S7 520 aaPredicted RBP15.39■□□□□ 0.05
TRIM11-204ENST00000493030 BRAPQ7Z569 592 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 ZBTB40Q9NUA8 1239 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 PRIM1P49642 420 aaKnown RBP15.39■□□□□ 0.05
TRIM11-204ENST00000493030 KARSQ15046 597 aaKnown RBP15.39■□□□□ 0.05
TRIM11-204ENST00000493030 PRAG1Q86YV5 1406 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 ARFGAP3Q9NP61 516 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 LZTFL1Q9NQ48 299 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 B4E1Z4 1266 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 G2E3Q7L622 706 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 IQUBQ8NA54 791 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 ZBTB9Q96C00 473 aa15.39■□□□□ 0.05
TRIM11-204ENST00000493030 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 SREK1Q8WXA9 508 aaKnown RBP15.38■□□□□ 0.05
TRIM11-204ENST00000493030 RBM28Q9NW13 759 aaKnown RBP15.38■□□□□ 0.05
TRIM11-204ENST00000493030 C6orf163Q5TEZ5 329 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 FBF1Q8TES7 1133 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 SYCP2Q9BX26 1530 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 RAPGEF1Q13905 1077 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 CCDC77Q9BR77 488 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 IFNKQ9P0W0 207 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRIM11-204ENST00000493030 V9GYY5 206 aaPredicted RBP15.38■□□□□ 0.05
TRIM11-204ENST00000493030 NUP160Q12769 1436 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 KLHDC4Q8TBB5 520 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 ARMT1Q9H993 441 aa15.38■□□□□ 0.05
TRIM11-204ENST00000493030 CCNL1Q9UK58 526 aaPredicted RBP15.38■□□□□ 0.05
TRIM11-204ENST00000493030 FCHSD1Q86WN1 690 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 HARSP12081 509 aaKnown RBP15.37■□□□□ 0.05
TRIM11-204ENST00000493030 HELLSQ9NRZ9 838 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 RAD50Q92878 1312 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 ZNF790Q6PG37 636 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 CCDC63Q8NA47 563 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 A0A1B0GVL5 298 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 ATP2A1O14983 1001 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 CHMP2AO43633 222 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 HIBADHP31937 336 aaKnown RBP15.37■□□□□ 0.05
TRIM11-204ENST00000493030 MXRA7P84157 204 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
TRIM11-204ENST00000493030 ATP6V0A2Q9Y487 856 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 CEP83Q9Y592 693 aa15.37■□□□□ 0.05
TRIM11-204ENST00000493030 EYA2O00167 538 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 ITSN2Q9NZM3 1697 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 PPP1R9BQ96SB3 815 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 ZNF518AQ6AHZ1 1483 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 KIF4AO95239 1232 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 PLBD2Q8NHP8 589 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 ZNF594Q96JF6 807 aaPredicted RBP15.36■□□□□ 0.05
TRIM11-204ENST00000493030 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 DYNC1I1O14576 645 aa15.36■□□□□ 0.05
TRIM11-204ENST00000493030 SMIM23A6NLE4 172 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 SV2BQ7L1I2 683 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 LUC7L2Q9Y383 392 aaKnown RBP15.35■□□□□ 0.05
TRIM11-204ENST00000493030 PUM3Q15397 648 aaKnown RBP15.35■□□□□ 0.05
TRIM11-204ENST00000493030 ZYXQ15942 572 aaKnown RBP15.35■□□□□ 0.05
TRIM11-204ENST00000493030 ZNF569Q5MCW4 686 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 ATRIPQ8WXE1 791 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 PTPRKQ15262 1439 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 PRDM1O75626 825 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 TAF12Q16514 161 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 TNNI3KQ59H18 835 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 DBNDD2Q9BQY9 259 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 FPGT-TNNI3KV9GXZ4 949 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 XRCC6P12956 609 aaKnown RBP eCLIP15.35■□□□□ 0.05
TRIM11-204ENST00000493030 USP26Q9BXU7 913 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 SH2D4AQ9H788 454 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 CFAP43Q8NDM7 1665 aa15.35■□□□□ 0.05
TRIM11-204ENST00000493030 TRAF5O00463 557 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 CCT6AP40227 531 aaKnown RBP15.34■□□□□ 0.05
TRIM11-204ENST00000493030 BIRC3Q13489 604 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms