RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CHMP4CQ96CF2 233 aa16.62■□□□□ 0.25
PTPN7-216ENST00000492977 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
PTPN7-216ENST00000492977 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
PTPN7-216ENST00000492977 APPP05067 770 aa16.61■□□□□ 0.25
PTPN7-216ENST00000492977 ZSCAN22P10073 491 aaPredicted RBP16.61■□□□□ 0.25
PTPN7-216ENST00000492977 PDCP20941 246 aa16.61■□□□□ 0.25
PTPN7-216ENST00000492977 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
PTPN7-216ENST00000492977 NCOA7Q8NI08 942 aa16.61■□□□□ 0.25
PTPN7-216ENST00000492977 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
PTPN7-216ENST00000492977 BRF1Q92994 677 aa16.61■□□□□ 0.25
PTPN7-216ENST00000492977 GTF3C6Q969F1 213 aa16.61■□□□□ 0.25
PTPN7-216ENST00000492977 IQSEC3Q9UPP2 1182 aaPredicted RBP16.61■□□□□ 0.25
PTPN7-216ENST00000492977 LEMD3Q9Y2U8 911 aa16.61■□□□□ 0.25
PTPN7-216ENST00000492977 MBD4O95243 580 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 HAND2P61296 217 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 TMED8Q6PL24 325 aaPredicted RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 FLAD1Q8NFF5 587 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 TFCP2L1Q9NZI6 479 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 PFKFB2O60825 505 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 MCM5P33992 734 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 RALYLQ86SE5 291 aaKnown RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 ZNF274Q96GC6 653 aaPredicted RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 RBM17Q96I25 401 aaKnown RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 LLPHQ9BRT6 129 aaKnown RBP16.6■□□□□ 0.25
PTPN7-216ENST00000492977 ABCF2Q9UG63 623 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 ATP6V1DQ9Y5K8 247 aa16.6■□□□□ 0.25
PTPN7-216ENST00000492977 IGSF3O75054 1194 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 HOXA10P31260 410 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-216ENST00000492977 EVCP57679 992 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 DDR1Q08345 913 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 TRDNQ13061 729 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 STK3Q13188 491 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 KLHL40Q2TBA0 621 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 MB21D2Q8IYB1 491 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-216ENST00000492977 IFNL3Q8IZI9 196 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 LRRC2Q9BYS8 371 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 NACAP1Q9BZK3 213 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 RAI14Q9P0K7 980 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 ANKIB1Q9P2G1 1089 aa16.59■□□□□ 0.25
PTPN7-216ENST00000492977 XDHP47989 1333 aa16.58■□□□□ 0.25
PTPN7-216ENST00000492977 IRS2Q9Y4H2 1338 aa16.58■□□□□ 0.25
PTPN7-216ENST00000492977 COL1A1P02452 1464 aaPredicted RBP16.58■□□□□ 0.25
PTPN7-216ENST00000492977 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
PTPN7-216ENST00000492977 BBOX1O75936 387 aa16.58■□□□□ 0.24
PTPN7-216ENST00000492977 CYP7A1P22680 504 aa16.58■□□□□ 0.24
PTPN7-216ENST00000492977 KLRK1P26718 216 aa16.58■□□□□ 0.24
PTPN7-216ENST00000492977 C15orf52Q6ZUT6 534 aaKnown RBP16.58■□□□□ 0.24
PTPN7-216ENST00000492977 NAPBQ9H115 298 aa16.58■□□□□ 0.24
PTPN7-216ENST00000492977 ARMT1Q9H993 441 aa16.58■□□□□ 0.24
PTPN7-216ENST00000492977 GSG1L2A8MUP6 293 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 PRC1O43663 620 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 F13A1P00488 732 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
PTPN7-216ENST00000492977 CRAMP1Q96RY5 1269 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 NBPF3Q9H094 633 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 DDX49Q9Y6V7 483 aaKnown RBP16.57■□□□□ 0.24
PTPN7-216ENST00000492977 MYH13Q9UKX3 1938 aa16.57■□□□□ 0.24
PTPN7-216ENST00000492977 PRPF40AO75400 957 aaKnown RBP16.56■□□□□ 0.24
PTPN7-216ENST00000492977 APOBRQ0VD83 1088 aa16.56■□□□□ 0.24
PTPN7-216ENST00000492977 SCRN1Q12765 414 aa16.56■□□□□ 0.24
PTPN7-216ENST00000492977 LCORLQ8N3X6 602 aa16.56■□□□□ 0.24
PTPN7-216ENST00000492977 EPB41L4AQ9HCS5 686 aaPredicted RBP16.56■□□□□ 0.24
PTPN7-216ENST00000492977 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
PTPN7-216ENST00000492977 MAGEB6P1A0A0J9YX57 407 aa16.55■□□□□ 0.24
PTPN7-216ENST00000492977 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
PTPN7-216ENST00000492977 TMC4Q7Z404 712 aa16.55■□□□□ 0.24
PTPN7-216ENST00000492977 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
PTPN7-216ENST00000492977 CACNA1SQ13698 1873 aa16.55■□□□□ 0.24
PTPN7-216ENST00000492977 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
PTPN7-216ENST00000492977 PDIA3P30101 505 aaKnown RBP16.55■□□□□ 0.24
PTPN7-216ENST00000492977 SPTY2D1Q68D10 685 aaPredicted RBP16.55■□□□□ 0.24
PTPN7-216ENST00000492977 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
PTPN7-216ENST00000492977 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
PTPN7-216ENST00000492977 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
PTPN7-216ENST00000492977 SMARCC2Q8TAQ2 1214 aa16.55■□□□□ 0.24
PTPN7-216ENST00000492977 GZF1Q9H116 711 aaPredicted RBP16.55■□□□□ 0.24
PTPN7-216ENST00000492977 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
PTPN7-216ENST00000492977 RGPD4Q7Z3J3 1758 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 ANTXR2P58335 489 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 HMGN5P82970 282 aaKnown RBP16.54■□□□□ 0.24
PTPN7-216ENST00000492977 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 TXNRD3Q86VQ6 643 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 MIGA1Q8NAN2 632 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
PTPN7-216ENST00000492977 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 CNNM2Q9H8M5 875 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
PTPN7-216ENST00000492977 PRKAB2O43741 272 aa16.53■□□□□ 0.24
PTPN7-216ENST00000492977 TDO2P48775 406 aa16.53■□□□□ 0.24
PTPN7-216ENST00000492977 ZNF804AQ7Z570 1209 aa16.53■□□□□ 0.24
PTPN7-216ENST00000492977 TDRD7Q8NHU6 1098 aaKnown RBP16.53■□□□□ 0.24
PTPN7-216ENST00000492977 WDR66Q8TBY9 1149 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms