RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 EIF6P56537 245 aaKnown RBP5.99□□□□□ -1.45
UBR4-215ENST00000492606 WASHC4Q2M389 1173 aa5.99□□□□□ -1.45
UBR4-215ENST00000492606 RGL3Q3MIN7 710 aa5.99□□□□□ -1.45
UBR4-215ENST00000492606 FAM160A2Q8N612 972 aaPredicted RBP5.99□□□□□ -1.45
UBR4-215ENST00000492606 ERO1AQ96HE7 468 aa5.99□□□□□ -1.45
UBR4-215ENST00000492606 USB1Q9BQ65 265 aaKnown RBP5.99□□□□□ -1.45
UBR4-215ENST00000492606 TRAIPQ9BWF2 469 aa5.99□□□□□ -1.45
UBR4-215ENST00000492606 THEGQ9P2T0 379 aa5.99□□□□□ -1.45
UBR4-215ENST00000492606 TSR3Q9UJK0 312 aaKnown RBP5.99□□□□□ -1.45
UBR4-215ENST00000492606 SSC5DA1L4H1 1573 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 KDRP35968 1356 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 ADM5C9JUS6 153 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 FARP2O94887 1054 aaPredicted RBP5.98□□□□□ -1.45
UBR4-215ENST00000492606 Q3C1V9 767 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 SOGA3Q5TF21 947 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 C7orf61Q8IZ16 206 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 RETREG2Q8NC44 543 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 ANKS1AQ92625 1134 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 PODXL2Q9NZ53 605 aa5.98□□□□□ -1.45
UBR4-215ENST00000492606 COL15A1P39059 1388 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 SHTN1A0MZ66 631 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 POTEMA6NI47 508 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 GJA8P48165 433 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 PPP4CP60510 307 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 CCDC93Q567U6 631 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 USPL1Q5W0Q7 1092 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 ANKK1Q8NFD2 765 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 PPM1EQ8WY54 764 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 OCSTAMPQ9BR26 566 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 PPP1R12CQ9BZL4 782 aa5.97□□□□□ -1.45
UBR4-215ENST00000492606 TEP1Q99973 2627 aaKnown RBP5.96□□□□□ -1.45
UBR4-215ENST00000492606 MYO15AQ9UKN7 3530 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 WDR87Q6ZQQ6 2873 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 PRR33A8MZF0 331 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 PDIA4P13667 645 aaKnown RBP5.96□□□□□ -1.46
UBR4-215ENST00000492606 MOB2Q70IA6 237 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 WWC1Q8IX03 1113 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 JDP2Q8WYK2 163 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 WNT2BQ93097 391 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 CNKSR1Q969H4 720 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 LTV1Q96GA3 475 aaPredicted RBP5.96□□□□□ -1.46
UBR4-215ENST00000492606 ATG3Q9NT62 314 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 ZSWIM8A7E2V4 1837 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 TJP1Q07157 1748 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 BPTFQ12830 3046 aa5.96□□□□□ -1.46
UBR4-215ENST00000492606 FAM186AA6NE01 2351 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.95□□□□□ -1.46
UBR4-215ENST00000492606 CYP27B1O15528 508 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 GFRA3O60609 400 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 FBXO45P0C2W1 286 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 JUNDP17535 347 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 GMPSP49915 693 aaPredicted RBP5.95□□□□□ -1.46
UBR4-215ENST00000492606 KRT26Q7Z3Y9 468 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 PRR14Q9BWN1 585 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 MAP10Q9P2G4 905 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 PCDHB3Q9Y5E6 796 aa5.95□□□□□ -1.46
UBR4-215ENST00000492606 DMDP11532 3685 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 PALM3A6NDB9 673 aaPredicted RBP5.94□□□□□ -1.46
UBR4-215ENST00000492606 DXOO77932 396 aaKnown RBP5.94□□□□□ -1.46
UBR4-215ENST00000492606 FMNL1O95466 1100 aaPredicted RBP5.94□□□□□ -1.46
UBR4-215ENST00000492606 GJB1P08034 283 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 ID4P47928 161 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 PTPRNQ16849 979 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 MSS51Q4VC12 460 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 STYK1Q6J9G0 422 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 THSD4Q6ZMP0 1018 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 NKX2-3Q8TAU0 364 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 UIMC1Q96RL1 719 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 BRIP1Q9BX63 1249 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 KCNH6Q9H252 994 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 PRDM9Q9NQV7 894 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 ZNF831Q5JPB2 1677 aa5.94□□□□□ -1.46
UBR4-215ENST00000492606 SNED1Q8TER0 1413 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 PI4K2BG5E9Z4 385 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 UBE2Q2LH0YL09 131 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 NR1I2O75469 434 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 SRGNP10124 158 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 PDE6BP35913 854 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 MMP16P51512 607 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 GRIN2CQ14957 1233 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 ST3GAL2Q16842 350 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 TBC1D9Q6ZT07 1266 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 EVA1BQ9NVM1 165 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 TFIP11Q9UBB9 837 aaKnown RBP5.93□□□□□ -1.46
UBR4-215ENST00000492606 FKBPLQ9UIM3 349 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 CD163L1Q9NR16 1453 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 DMXL1Q9Y485 3027 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 GVINP1Q7Z2Y8 2422 aa5.93□□□□□ -1.46
UBR4-215ENST00000492606 ZNF462Q96JM2 2506 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 MYO9BQ13459 2157 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 RFX1P22670 979 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 SOX11P35716 441 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 KCNQ1P51787 676 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 SP3Q02447 781 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 SREBF2Q12772 1141 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 NR1H3Q13133 447 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 U2AF1L4Q8WU68 220 aaKnown RBP5.92□□□□□ -1.46
UBR4-215ENST00000492606 PBXIP1Q96AQ6 731 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 PDZRN3Q9UPQ7 1066 aa5.92□□□□□ -1.46
UBR4-215ENST00000492606 MAP3K19Q56UN5 1328 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms