RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SOX13Q9UN79 622 aa5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 RPLP1P05386 114 aaKnown RBP5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 RAB6AP20340 208 aa5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 HP1BP3Q5SSJ5 553 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 ZNF574Q6ZN55 896 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 BHLHE22Q8NFJ8 381 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 CLP1Q92989 425 aaKnown RBP5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 PRIMPOLQ96LW4 560 aa5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 SOX17Q9H6I2 414 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 DZANK1Q9NVP4 752 aa5.45□□□□□ -1.54
HMGB1P30-201ENST00000492455 ZNF865P0CJ78 1059 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 PCSK2P16519 638 aa5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 TRIM26Q12899 539 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 OCLNQ16625 522 aa5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 SWI5Q1ZZU3 235 aa5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 LILRA6Q6PI73 481 aa5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 TMEM102Q8N9M5 508 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 PMEPA1Q969W9 287 aa5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 TMEM63CQ9P1W3 806 aa5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 SALL4Q9UJQ4 1053 aa5.44□□□□□ -1.54
HMGB1P30-201ENST00000492455 SOX1O00570 391 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P30-201ENST00000492455 PRMT3O60678 531 aa5.43□□□□□ -1.54
HMGB1P30-201ENST00000492455 NFICP08651 508 aa5.43□□□□□ -1.54
HMGB1P30-201ENST00000492455 RAP1GAPP47736 663 aa5.43□□□□□ -1.54
HMGB1P30-201ENST00000492455 CYP27C1Q4G0S4 372 aa5.43□□□□□ -1.54
HMGB1P30-201ENST00000492455 HGSNATQ68CP4 663 aa5.43□□□□□ -1.54
HMGB1P30-201ENST00000492455 STIM2Q9P246 746 aa5.43□□□□□ -1.54
HMGB1P30-201ENST00000492455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 LRRC10BA6NIK2 292 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 NFKBIEO00221 500 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 TNFRSF10BO14763 440 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 ADH5P11766 374 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 ACPPP15309 386 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 FUT4P22083 530 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 SSFA2P28290 1259 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 GSTM4Q03013 218 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 GLIS3Q8NEA6 775 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 PI4K2BQ8TCG2 481 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 GATA6Q92908 595 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 FAM53CQ9NYF3 392 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 NCANO14594 1321 aa5.42□□□□□ -1.54
HMGB1P30-201ENST00000492455 PRRG2O14669 202 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 BRD1O95696 1058 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 FAM26DQ5JW98 314 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 DYMQ7RTS9 669 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 SPRED2Q7Z698 418 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 ASAP3Q8TDY4 903 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 NUDT16Q96DE0 195 aaKnown RBP5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 PPP1R16BQ96T49 567 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 OSMRQ99650 979 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 MKNK1Q9BUB5 465 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 ZFYVE1Q9HBF4 777 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 CNTN3Q9P232 1028 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 ACTL7BQ9Y614 415 aa5.41□□□□□ -1.54
HMGB1P30-201ENST00000492455 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 B8ZZF3 427 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 TRPA1O75762 1119 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 DLGAP3O95886 979 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 RNASE1P07998 156 aaKnown RBP5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 ATP2B4P23634 1241 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 BNIP3Q12983 259 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 NAA30Q147X3 362 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 OGFOD3Q6PK18 319 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 VN1R5Q7Z5H4 357 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 C1orf127Q8N9H9 656 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 HHIPQ96QV1 700 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 SEMA6CQ9H3T2 930 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 RAD18Q9NS91 495 aa5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 CXXC1Q9P0U4 656 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P30-201ENST00000492455 PDE4CQ08493 712 aa5.39□□□□□ -1.55
HMGB1P30-201ENST00000492455 CAPN12Q6ZSI9 719 aa5.39□□□□□ -1.55
HMGB1P30-201ENST00000492455 TXNDC2Q86VQ3 553 aa5.39□□□□□ -1.55
HMGB1P30-201ENST00000492455 NETO1Q8TDF5 533 aa5.39□□□□□ -1.55
HMGB1P30-201ENST00000492455 NXPE3Q969Y0 559 aa5.39□□□□□ -1.55
HMGB1P30-201ENST00000492455 AP4E1Q9UPM8 1137 aa5.39□□□□□ -1.55
HMGB1P30-201ENST00000492455 DAGLAQ9Y4D2 1042 aa5.39□□□□□ -1.55
HMGB1P30-201ENST00000492455 CYP11A1P05108 521 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 ESRRAP11474 423 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 EDN3P14138 238 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 ASPAP45381 313 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 MESP2Q0VG99 397 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 AKAP4Q5JQC9 854 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 XKR5Q6UX68 686 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 ARHGAP27Q6ZUM4 889 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 ANKLE2Q86XL3 938 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 AEBP1Q8IUX7 1158 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 LRRC56Q8IYG6 542 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 LRRN4CLQ8ND94 238 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 ACSS3Q9H6R3 686 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 MBNL3Q9NUK0 354 aaKnown RBP5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 VAV3Q9UKW4 847 aa5.38□□□□□ -1.55
HMGB1P30-201ENST00000492455 TSPAN15O95858 294 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 CD8BP10966 210 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 PRKCQQ04759 706 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 KCNA1Q09470 495 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 KCNMB1Q16558 191 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 MLANAQ16655 118 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 C8orf34Q49A92 452 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 ZSWIM9Q86XI8 627 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms