RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 LMTK2Q8IWU2 1503 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 A0A087WWV3 80 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 MYO1FO00160 1098 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 MEFVO15553 781 aaPredicted RBP11.08□□□□□ -0.64
VPS8-225ENST00000492449 CCNHP51946 323 aaPredicted RBP11.08□□□□□ -0.64
VPS8-225ENST00000492449 RWDD2BP57060 319 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 PIP4K2BP78356 416 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 RCSD1Q6JBY9 416 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 NAA16Q6N069 864 aaPredicted RBP11.08□□□□□ -0.64
VPS8-225ENST00000492449 CCDC50Q8IVM0 306 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
VPS8-225ENST00000492449 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 CCDC26Q8TAB7 109 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 KLC4Q9NSK0 619 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 SPATS2LQ9NUQ6 558 aaKnown RBP11.08□□□□□ -0.64
VPS8-225ENST00000492449 GGA2Q9UJY4 613 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 ZEB2O60315 1214 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 DTNBO60941 627 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
VPS8-225ENST00000492449 UBASH3AP57075 661 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 TOGARAM2Q6ZUX3 1019 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 FSIP1Q8NA03 581 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 SH3GL2Q99962 352 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 ATP6V0A4Q9HBG4 840 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 CEMIPQ8WUJ3 1361 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 CHL1O00533 1208 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 DRP2Q13474 957 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
VPS8-225ENST00000492449 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 BCAS4Q8TDM0 211 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 MRPS27Q92552 414 aaKnown RBP11.07□□□□□ -0.64
VPS8-225ENST00000492449 VCPKMTQ9H867 229 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 ATP7BP35670 1465 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
VPS8-225ENST00000492449 MPHOSPH10O00566 681 aaKnown RBP11.07□□□□□ -0.64
VPS8-225ENST00000492449 PFKFB2O60825 505 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 TRAF1Q13077 416 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 CREB3L3Q68CJ9 461 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 BRF1Q92994 677 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 CAPS2Q9BXY5 557 aa11.07□□□□□ -0.64
VPS8-225ENST00000492449 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 IPO7O95373 1038 aaKnown RBP11.06□□□□□ -0.64
VPS8-225ENST00000492449 RPS6KB1P23443 525 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 SKOR1P84550 965 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 ZNF396Q96N95 335 aaPredicted RBP11.06□□□□□ -0.64
VPS8-225ENST00000492449 PUF60Q9UHX1 559 aaKnown RBP11.06□□□□□ -0.64
VPS8-225ENST00000492449 KIAA0754O94854 1291 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 CLSTN1O94985 981 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 ACTN3Q08043 901 aaPredicted RBP11.06□□□□□ -0.64
VPS8-225ENST00000492449 ADALQ6DHV7 355 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 DPF2Q92785 391 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 NRKQ7Z2Y5 1582 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 JCADQ9P266 1359 aa11.06□□□□□ -0.64
VPS8-225ENST00000492449 CTAGE15A4D2H0 777 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 MAP4K4O95819 1239 aaPredicted RBP11.05□□□□□ -0.64
VPS8-225ENST00000492449 CTAGE8P0CG41 777 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 IL13P35225 146 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
VPS8-225ENST00000492449 MICALCLQ6ZW33 695 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 CTAGE6Q86UF2 777 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 CTAGE4Q8IX94 777 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 TC2NQ8N9U0 490 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 SMARCC2Q8TAQ2 1214 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 MAP4K1Q92918 833 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 BATF3Q9NR55 127 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 HOMER3Q9NSC5 361 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
VPS8-225ENST00000492449 RIMBP3CA6NJZ7 1639 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 RIMBP3BA6NNM3 1639 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 RIMBP3Q9UFD9 1639 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 TARSL2A2RTX5 802 aaKnown RBP11.05□□□□□ -0.64
VPS8-225ENST00000492449 CCDC175P0C221 793 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 MYBL2P10244 700 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 STIM1Q13586 685 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 CEP85LQ5SZL2 805 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 EFCAB2Q5VUJ9 269 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 ZSWIM4Q9H7M6 989 aa11.05□□□□□ -0.64
VPS8-225ENST00000492449 MRPL44Q9H9J2 332 aaKnown RBP11.05□□□□□ -0.64
VPS8-225ENST00000492449 AGPSO00116 658 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 ATP1A3P13637 1013 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 BLOC1S2Q6QNY1 142 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 BRAPQ7Z569 592 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 LLPHQ9BRT6 129 aaKnown RBP11.04□□□□□ -0.64
VPS8-225ENST00000492449 GOLGA6CA6NDK9 693 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 H3BQV1 296 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 RHOXF2BP0C7M4 288 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 GOLGA6DP0CG33 693 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 NEFHP12036 1026 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
VPS8-225ENST00000492449 CLNS1AP54105 237 aaKnown RBP11.04□□□□□ -0.64
VPS8-225ENST00000492449 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 RHOXF2Q9BQY4 288 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 SDF4Q9BRK5 362 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
VPS8-225ENST00000492449 CABP2Q9NPB3 220 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 GOLGA6AQ9NYA3 693 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms