RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	MFSD14B	Q5SR56	506 aa		24.54	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	DZIP1L	Q8IYY4	767 aa	Known RBP	24.54	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	LINS1	Q8NG48	757 aa		24.54	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	24.54	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	NKX2-3	Q8TAU0	364 aa		24.54	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	RBM27	Q9P2N5	1060 aa	Known RBP	24.54	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	TCP10L2	B9ZVM9	353 aa		24.53	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	ARHGAP39	Q9C0H5	1083 aa		24.53	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	TMEM39B	Q9GZU3	492 aa		24.53	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	CHMP3	Q9Y3E7	222 aa		24.53	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	PLIN1	O60240	522 aa		24.52	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	DNAAF4	Q8WXU2	420 aa		24.52	■■□□□ 1.52
CDK5RAP2-218	ENST00000491334	SPDYE5	A6NIY4	337 aa		24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	HOXD10	P28358	340 aa		24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	SNAPC2	Q13487	334 aa		24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	LDHAL6A	Q6ZMR3	332 aa		24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	ERO1B	Q86YB8	467 aa		24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	CDAN1	Q8IWY9	1227 aa		24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	SLC17A8	Q8NDX2	589 aa		24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	TDRD7	Q8NHU6	1098 aa	Known RBP	24.51	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	DLL1	O00548	723 aa		24.5	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	FOXO4	P98177	505 aa		24.5	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	FLII	Q13045	1269 aa		24.5	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	DDX10	Q13206	875 aa	Known RBP	24.5	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	TWISTNB	Q3B726	338 aa	Predicted RBP	24.5	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	HTATIP2	Q9BUP3	242 aa		24.5	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	BTBD19	C9JJ37	291 aa		24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	FKBP5	Q13451	457 aa	Predicted RBP	24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	CCDC57	Q2TAC2	916 aa		24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	TAF7L	Q5H9L4	462 aa		24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	TSR2	Q969E8	191 aa	Known RBP	24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	CNNM1	Q9NRU3	951 aa		24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	NR2E3	Q9Y5X4	410 aa		24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	RANBP2	P49792	3224 aa	Known RBP	24.49	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	HIBADH	P31937	336 aa	Known RBP	24.48	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	CRK	P46108	304 aa		24.48	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	MTFR1	Q15390	333 aa		24.48	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	HOOK2	Q96ED9	719 aa		24.48	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	SHISA4	Q96DD7	197 aa		24.47	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	SRRD	Q9UH36	339 aa		24.47	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	OTOF	Q9HC10	1997 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	IRF6	O14896	467 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	GRK4	P32298	578 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	PSMC4	P43686	418 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	UBE4A	Q14139	1066 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	LMBR1L	Q6UX01	489 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	C17orf99	Q6UX52	265 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	RAET1E	Q8TD07	263 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	SNCAIP	Q9Y6H5	919 aa		24.46	■■□□□ 1.51
CDK5RAP2-218	ENST00000491334	GJB1	P08034	283 aa		24.45	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	GJA8	P48165	433 aa		24.45	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	HDLBP	Q00341	1268 aa	Known RBP	24.45	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	PPIL2	Q13356	520 aa		24.45	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	ZNF594	Q96JF6	807 aa	Predicted RBP	24.45	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	TRIM47	Q96LD4	638 aa		24.45	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	WRNIP1	Q96S55	665 aa		24.45	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	FMNL1	O95466	1100 aa	Predicted RBP	24.44	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	GYG1	P46976	350 aa		24.44	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	ZKSCAN4	Q969J2	545 aa	Predicted RBP	24.44	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	FAM84B	Q96KN1	310 aa	Predicted RBP	24.44	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	ECM2	O94769	699 aa	Predicted RBP	24.43	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	PRO3102	Q9H379	93 aa		24.43	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	TMOD2	Q9NZR1	351 aa		24.43	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	BIN2	Q9UBW5	565 aa	Predicted RBP	24.43	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	CPA4	Q9UI42	421 aa		24.43	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	RIPOR2	Q9Y4F9	1068 aa		24.43	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	CCL5	P13501	91 aa		24.42	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	PPAT	Q06203	517 aa		24.42	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	UBE2Q1	Q7Z7E8	422 aa		24.42	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	RNF208	Q9H0X6	261 aa		24.42	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334		A0A0C4DFX4	3053 aa		24.41	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	OSBP	P22059	807 aa		24.41	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	UBXN2A	P68543	259 aa		24.41	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	DCAF15	Q66K64	600 aa		24.41	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	FAM83A	Q86UY5	434 aa		24.41	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	TEKT1	Q969V4	418 aa		24.41	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	CTGF	P29279	349 aa		24.4	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	FKBP1C	Q5VVH2	108 aa		24.4	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	ANKRD23	Q86SG2	305 aa		24.4	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	VPS37D	Q86XT2	251 aa		24.4	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	TBC1D22A	Q8WUA7	517 aa		24.4	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334	MRI	Q9BWK5	157 aa		24.4	■■□□□ 1.5
CDK5RAP2-218	ENST00000491334		A0A1W2PPC1	479 aa		24.39	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	PDHX	O00330	501 aa		24.39	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	CACNB3	P54284	484 aa		24.39	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	MYPN	Q86TC9	1320 aa		24.38	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	ZBTB7B	O15156	539 aa	Predicted RBP	24.38	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	FRAT2	O75474	233 aa	Predicted RBP	24.38	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	EPHA10	Q5JZY3	1008 aa		24.38	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	BEND3	Q5T5X7	828 aa		24.38	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	24.38	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	ZNF341	Q9BYN7	854 aa		24.38	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	GRIK5	Q16478	980 aa		24.37	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	CCDC27	Q2M243	656 aa		24.37	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	FBXO33	Q7Z6M2	555 aa		24.37	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	ZDHHC15	Q96MV8	337 aa		24.37	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	GRM8	O00222	908 aa		24.36	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	CAPN2	P17655	700 aa		24.36	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	CHAF1A	Q13111	956 aa	Predicted RBP	24.36	■■□□□ 1.49
CDK5RAP2-218	ENST00000491334	U2AF1L4	Q8WU68	220 aa	Known RBP	24.36	■■□□□ 1.49

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms