RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 SP3Q02447 781 aa10.78□□□□□ -0.68
HPS4-215ENST00000491142 DLGAP5Q15398 846 aa10.78□□□□□ -0.68
HPS4-215ENST00000491142 NBPF12Q5TAG4 269 aaPredicted RBP10.78□□□□□ -0.68
HPS4-215ENST00000491142 CERS5Q8N5B7 392 aa10.78□□□□□ -0.68
HPS4-215ENST00000491142 TSR2Q969E8 191 aaKnown RBP10.78□□□□□ -0.68
HPS4-215ENST00000491142 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
HPS4-215ENST00000491142 AOX1Q06278 1338 aa10.78□□□□□ -0.68
HPS4-215ENST00000491142 KIAA0100Q14667 2235 aaKnown RBP10.77□□□□□ -0.68
HPS4-215ENST00000491142 COL1A1P02452 1464 aaPredicted RBP10.77□□□□□ -0.69
HPS4-215ENST00000491142 CLRN2A0PK11 232 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 PI4KAP2A4QPH2 592 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 F8W031 263 aaPredicted RBP10.77□□□□□ -0.69
HPS4-215ENST00000491142 SNAP23O00161 211 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 USP2O75604 605 aaPredicted RBP10.77□□□□□ -0.69
HPS4-215ENST00000491142 PDE4AP27815 886 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 CWF19L2Q2TBE0 894 aaKnown RBP10.77□□□□□ -0.69
HPS4-215ENST00000491142 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 PI4KAP1Q8N8J0 262 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 PANK1Q8TE04 598 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 ZNF333Q96JL9 665 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 PRMT6Q96LA8 375 aaPredicted RBP10.77□□□□□ -0.69
HPS4-215ENST00000491142 TMEM106CQ9BVX2 250 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 CD209Q9NNX6 404 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 IFT57Q9NWB7 429 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 COG6Q9Y2V7 657 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 SPEF2Q9C093 1822 aa10.77□□□□□ -0.69
HPS4-215ENST00000491142 RBBP6Q7Z6E9 1792 aaKnown RBP10.76□□□□□ -0.69
HPS4-215ENST00000491142 TESPA1A2RU30 521 aaPredicted RBP10.76□□□□□ -0.69
HPS4-215ENST00000491142 IGHMBP2P38935 993 aaKnown RBP10.76□□□□□ -0.69
HPS4-215ENST00000491142 GNAI1P63096 354 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 SUPT20HL1Q3ZLR7 823 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 OTUD7BQ6GQQ9 843 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 KSR2Q6VAB6 950 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 MTMR14Q8NCE2 650 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 FRAT1Q92837 279 aaPredicted RBP10.76□□□□□ -0.69
HPS4-215ENST00000491142 ANKRD2Q9GZV1 360 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 PPP2R3BQ9Y5P8 575 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
HPS4-215ENST00000491142 UNCXA6NJT0 531 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 NEURL1BA8MQ27 555 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 H7C1W4 665 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
HPS4-215ENST00000491142 RLBP1P12271 317 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 ITGA6P23229 1130 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 KCNJ4P48050 445 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 IREB2P48200 963 aaKnown RBP10.75□□□□□ -0.69
HPS4-215ENST00000491142 CHRNDQ07001 517 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 MVPQ14764 893 aaKnown RBP10.75□□□□□ -0.69
HPS4-215ENST00000491142 CFAP100Q494V2 611 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 CCDC30Q5VVM6 783 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 UBE3BQ7Z3V4 1068 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 DZIP1LQ8IYY4 767 aaKnown RBP10.75□□□□□ -0.69
HPS4-215ENST00000491142 TSPYL6Q8N831 410 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 MPHOSPH8Q99549 860 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 ELP3Q9H9T3 547 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 VEZTQ9HBM0 779 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 PTCH2Q9Y6C5 1203 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 RANBP2P49792 3224 aaKnown RBP10.75□□□□□ -0.69
HPS4-215ENST00000491142 IRS2Q9Y4H2 1338 aa10.75□□□□□ -0.69
HPS4-215ENST00000491142 H0YGN5 161 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 TAF5LO75529 589 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 RASA3Q14644 834 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 SLC9C1Q4G0N8 1177 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 ANKRD13AQ8IZ07 590 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
HPS4-215ENST00000491142 OPTNQ96CV9 577 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 OTUD5Q96G74 571 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 ANP32EQ9BTT0 268 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 JAG2Q9Y219 1238 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 CACNA1FO60840 1977 aa10.74□□□□□ -0.69
HPS4-215ENST00000491142 IPO8O15397 1037 aaKnown RBP10.73□□□□□ -0.69
HPS4-215ENST00000491142 MYO1BO43795 1136 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 IGHDP01880 384 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 CSF1RP07333 972 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 ANP32AP39687 249 aaKnown RBP10.73□□□□□ -0.69
HPS4-215ENST00000491142 RBM5P52756 815 aaKnown RBP eCLIP10.73□□□□□ -0.69
HPS4-215ENST00000491142 NEXNQ0ZGT2 675 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 SLC4A8Q2Y0W8 1093 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 ATF7IPQ6VMQ6 1270 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 G2E3Q7L622 706 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 NBPF11Q86T75 865 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 BRI3BPQ8WY22 251 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 TNNQ9UQP3 1299 aa10.73□□□□□ -0.69
HPS4-215ENST00000491142 LAMB1P07942 1786 aa10.72□□□□□ -0.69
HPS4-215ENST00000491142 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
HPS4-215ENST00000491142 TRIM27P14373 513 aa10.72□□□□□ -0.69
HPS4-215ENST00000491142 IL1R1P14778 569 aa10.72□□□□□ -0.69
HPS4-215ENST00000491142 CASP7P55210 303 aa10.72□□□□□ -0.69
HPS4-215ENST00000491142 ASTLQ6HA08 431 aaPredicted RBP10.72□□□□□ -0.69
HPS4-215ENST00000491142 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.72□□□□□ -0.69
HPS4-215ENST00000491142 FTSJ3Q8IY81 847 aaKnown RBP10.72□□□□□ -0.69
HPS4-215ENST00000491142 FAM43AQ8N2R8 423 aa10.72□□□□□ -0.69
HPS4-215ENST00000491142 SH3TC2Q8TF17 1288 aa10.72□□□□□ -0.69
HPS4-215ENST00000491142 ARHGAP45Q92619 1136 aa10.72□□□□□ -0.69
HPS4-215ENST00000491142 PLA2G12BQ9BX93 195 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms