RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CCDC180Q9P1Z9 1646 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 A0A1W2PP55 124 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 NFKBIEO00221 500 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 CYP26A1O43174 497 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 WNT11O96014 354 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 SLFN14P0C7P3 912 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 ESRRAP11474 423 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 MAPK1P28482 360 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 ASPAP45381 313 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 TRIM26Q12899 539 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 ORC1Q13415 861 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 USPL1Q5W0Q7 1092 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 PHLDB3Q6NSJ2 640 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 VN1R5Q7Z5H4 357 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 ARMC10Q8N2F6 343 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 KCNB2Q92953 911 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 FAM46AQ96IP4 442 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 DBNDD2Q9BQY9 259 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 PCGF6Q9BYE7 350 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 PIDD1Q9HB75 910 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 CBX8Q9HC52 389 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 GPN3Q9UHW5 284 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 SOX13Q9UN79 622 aa3.19□□□□□ -1.9
SNRNP40-207ENST00000491106 NFICP08651 508 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 NPR3P17342 541 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 GRIA4P48058 902 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 FCGRTP55899 365 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 PPP2R3AQ06190 1150 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 SOX4Q06945 474 aaPredicted RBP3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 MAP7Q14244 749 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 TP53INP2Q8IXH6 220 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 GALNT12Q8IXK2 581 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 RETREG2Q8NC44 543 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 CCDC74AQ96AQ1 378 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 ACSBG1Q96GR2 724 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 CITED4Q96RK1 184 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 NPHS2Q9NP85 383 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 EGFL7Q9UHF1 273 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 TRAK1Q9UPV9 953 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 HIF3AQ9Y2N7 669 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 DAGLAQ9Y4D2 1042 aa3.18□□□□□ -1.9
SNRNP40-207ENST00000491106 LOC100289279A0A1B0GTE1 492 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 MEGF11A6BM72 1044 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 EIF1AYO14602 144 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 PAX4O43316 350 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 LIG1P18858 919 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 MAPK8P45983 427 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 PEAR1Q5VY43 1037 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 GJD3Q8N144 294 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 SMG8Q8ND04 991 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 EPS8L3Q8TE67 593 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 DMRTB1Q96MA1 342 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 PIM2Q9P1W9 311 aa3.17□□□□□ -1.9
SNRNP40-207ENST00000491106 ZCCHC6Q5VYS8 1495 aaKnown RBP3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 TMEM238LA0A1B0GVL6 79 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 LMNB1P20700 586 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 GP2P55259 537 aaKnown RBP3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 CYP27A1Q02318 531 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 ZNF423Q2M1K9 1284 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 CDPF1Q6NVV7 123 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 CCNJLQ8IV13 435 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 PSMG3-AS1Q96PY0 264 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 CSRNP1Q96S65 589 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 METTL22Q9BUU2 404 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 TMPRSS13Q9BYE2 586 aa3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 BHLHE41Q9C0J9 482 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 SOX17Q9H6I2 414 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-207ENST00000491106 DCAF1Q9Y4B6 1507 aa3.15□□□□□ -1.9
SNRNP40-207ENST00000491106 LOC105371045A0A1W2PR82 267 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 AOC2O75106 756 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 MED26O95402 600 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 DLGAP3O95886 979 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 ADH5P11766 374 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 ATP2B2Q01814 1243 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 AP3B2Q13367 1082 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 CYP27C1Q4G0S4 372 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 KIAA0319Q5VV43 1072 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 Q6ZS46 218 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 CDC37L1Q7L3B6 337 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 ZDHHC13Q8IUH4 622 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 ZSCAN29Q8IWY8 852 aaPredicted RBP3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 TCF12Q99081 682 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 DNAJC25Q9H1X3 360 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 TMEM39AQ9NV64 488 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 SAMM50Q9Y512 469 aa3.15□□□□□ -1.91
SNRNP40-207ENST00000491106 PNMA6FA0A0J9YX94 578 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 FAM170BA6NMN3 283 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 ECEL1O95672 775 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 F13BP05160 661 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 TAL1P17542 331 aaPredicted RBP3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 TXKP42681 527 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 ARHGAP4P98171 946 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 MAP1SQ66K74 1059 aaPredicted RBP3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 NXPE4Q6UWF7 544 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 C2CD4AQ8NCU7 369 aaPredicted RBP3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 FLCNQ8NFG4 579 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 BCO2Q9BYV7 579 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 SUGCTQ9HAC7 445 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms