RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 TTF2Q9UNY4 1162 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-210ENST00000491064 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
CTDSP1-210ENST00000491064 DZIP1LQ8IYY4 767 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-210ENST00000491064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■□□□□ 9.3
CTDSP1-210ENST00000491064 ZNF594Q96JF6 807 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-210ENST00000491064 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
CTDSP1-210ENST00000491064 TCP10L2B9ZVM9 353 aa17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 H0YGN5 161 aa17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 PLIN1O60240 522 aa17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 MYCP01106 439 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 TDRD7Q8NHU6 1098 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 OTUD5Q96G74 571 aa17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 ARHGAP39Q9C0H5 1083 aa17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 CSADQ9Y600 493 aa17.36■□□□□ 0.37
CTDSP1-210ENST00000491064 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
CTDSP1-210ENST00000491064 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
CTDSP1-210ENST00000491064 LDHAL6AQ6ZMR3 332 aa17.35■□□□□ 0.37
CTDSP1-210ENST00000491064 CNNM1Q9NRU3 951 aa17.35■□□□□ 0.37
CTDSP1-210ENST00000491064 SPDYE5A6NIY4 337 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 TLR2O60603 784 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 CRKP46108 304 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 GYG1P46976 350 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 TNNI2P48788 182 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 LACTBP83111 547 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 CCDC57Q2TAC2 916 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
CTDSP1-210ENST00000491064 WDHD1O75717 1129 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 HIBADHP31937 336 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 UBE4AQ14139 1066 aa17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 FAM84BQ96KN1 310 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 ZCCHC17Q9NP64 241 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 SNCAIPQ9Y6H5 919 aa17.33■□□□□ 0.36
CTDSP1-210ENST00000491064 BTBD19C9JJ37 291 aa17.32■□□□□ 0.36
CTDSP1-210ENST00000491064 F6X3S4 739 aa17.32■□□□□ 0.36
CTDSP1-210ENST00000491064 GNRH1P01148 92 aa17.32■□□□□ 0.36
CTDSP1-210ENST00000491064 CETPP11597 493 aa17.32■□□□□ 0.36
CTDSP1-210ENST00000491064 KIF22Q14807 665 aa17.32■□□□□ 0.36
CTDSP1-210ENST00000491064 GRIK5Q16478 980 aa17.32■□□□□ 0.36
CTDSP1-210ENST00000491064 IL16Q14005 1332 aa17.31■□□□□ 0.36
CTDSP1-210ENST00000491064 CHRDL2Q6WN34 429 aa17.31■□□□□ 0.36
CTDSP1-210ENST00000491064 ERO1BQ86YB8 467 aa17.31■□□□□ 0.36
CTDSP1-210ENST00000491064 SHISA4Q96DD7 197 aa17.31■□□□□ 0.36
CTDSP1-210ENST00000491064 IRF6O14896 467 aa17.3■□□□□ 0.36
CTDSP1-210ENST00000491064 CACNB3P54284 484 aa17.3■□□□□ 0.36
CTDSP1-210ENST00000491064 PRMT2P55345 433 aa17.3■□□□□ 0.36
CTDSP1-210ENST00000491064 SNAPC2Q13487 334 aa17.3■□□□□ 0.36
CTDSP1-210ENST00000491064 MTFR1Q15390 333 aa17.3■□□□□ 0.36
CTDSP1-210ENST00000491064 WRNIP1Q96S55 665 aa17.3■□□□□ 0.36
CTDSP1-210ENST00000491064 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
CTDSP1-210ENST00000491064 GRM8O00222 908 aa17.29■□□□□ 0.36
CTDSP1-210ENST00000491064 VAMP4O75379 141 aa17.29■□□□□ 0.36
CTDSP1-210ENST00000491064 HDLBPQ00341 1268 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-210ENST00000491064 PPIL2Q13356 520 aa17.29■□□□□ 0.36
CTDSP1-210ENST00000491064 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-210ENST00000491064 LAMA3Q16787 3333 aa17.28■□□□□ 0.36
CTDSP1-210ENST00000491064 CTGFP29279 349 aa17.28■□□□□ 0.36
CTDSP1-210ENST00000491064 C17orf99Q6UX52 265 aa17.28■□□□□ 0.36
CTDSP1-210ENST00000491064 PUS3Q9BZE2 481 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-210ENST00000491064 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-210ENST00000491064 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-210ENST00000491064 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-210ENST00000491064 FBXO33Q7Z6M2 555 aa17.27■□□□□ 0.36
CTDSP1-210ENST00000491064 FAM83AQ86UY5 434 aa17.27■□□□□ 0.36
CTDSP1-210ENST00000491064 DPF3Q92784 378 aa17.27■□□□□ 0.36
CTDSP1-210ENST00000491064 TEKT1Q969V4 418 aa17.27■□□□□ 0.36
CTDSP1-210ENST00000491064 TRIM47Q96LD4 638 aa17.27■□□□□ 0.36
CTDSP1-210ENST00000491064 SRRDQ9UH36 339 aa17.27■□□□□ 0.36
CTDSP1-210ENST00000491064 PSMC4P43686 418 aa17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 TBC1D22AQ8WUA7 517 aa17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 CPA4Q9UI42 421 aa17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 RIPOR2Q9Y4F9 1068 aa17.26■□□□□ 0.35
CTDSP1-210ENST00000491064 COL6A3P12111 3177 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 OSBPP22059 807 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 GRK4P32298 578 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 PPATQ06203 517 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 DCAF15Q66K64 600 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 UBE2Q1Q7Z7E8 422 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 NKX2-3Q8TAU0 364 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 ZDHHC15Q96MV8 337 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 MRIQ9BWK5 157 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 TMOD2Q9NZR1 351 aa17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-210ENST00000491064 MROH5Q6ZUA9 1318 aa17.24■□□□□ 0.35
CTDSP1-210ENST00000491064 ADGRA2Q96PE1 1338 aa17.24■□□□□ 0.35
CTDSP1-210ENST00000491064 GJA8P48165 433 aa17.24■□□□□ 0.35
CTDSP1-210ENST00000491064 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-210ENST00000491064 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-210ENST00000491064 APOBEC3HQ6NTF7 200 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-210ENST00000491064 ANKRD23Q86SG2 305 aa17.24■□□□□ 0.35
CTDSP1-210ENST00000491064 RAET1EQ8TD07 263 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms