RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 TTF2Q9UNY4 1162 aaKnown RBP19.54■□□□□ 0.72
SCAMP3-208ENST00000490999 H0YGN5 161 aa19.53■□□□□ 0.72
SCAMP3-208ENST00000490999 ZFYVE28Q9HCC9 887 aa19.53■□□□□ 0.72
SCAMP3-208ENST00000490999 ARAP2Q8WZ64 1704 aa19.52■□□□□ 0.72
SCAMP3-208ENST00000490999 GYG1P46976 350 aa19.52■□□□□ 0.72
SCAMP3-208ENST00000490999 TNFAIP1Q13829 316 aa19.52■□□□□ 0.72
SCAMP3-208ENST00000490999 EPHA10Q5JZY3 1008 aa19.52■□□□□ 0.72
SCAMP3-208ENST00000490999 F6X3S4 739 aa19.51■□□□□ 0.71
SCAMP3-208ENST00000490999 GTF2A2P52657 109 aa19.51■□□□□ 0.71
SCAMP3-208ENST00000490999 CACNB3P54284 484 aa19.51■□□□□ 0.71
SCAMP3-208ENST00000490999 LMBR1LQ6UX01 489 aa19.51■□□□□ 0.71
SCAMP3-208ENST00000490999 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.51■□□□□ 0.711e-10■■■□□ 19.1
SCAMP3-208ENST00000490999 GRIK5Q16478 980 aa19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 TAF7LQ5H9L4 462 aa19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 NBPF11Q86T75 865 aa19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 DZIP1LQ8IYY4 767 aaKnown RBP19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 SERPINA10Q9UK55 444 aa19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 CSADQ9Y600 493 aa19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 FAM205AQ6ZU69 1335 aa19.5■□□□□ 0.71
SCAMP3-208ENST00000490999 CRKP46108 304 aa19.49■□□□□ 0.71
SCAMP3-208ENST00000490999 CHRDL2Q6WN34 429 aa19.49■□□□□ 0.71
SCAMP3-208ENST00000490999 LDHAL6AQ6ZMR3 332 aa19.49■□□□□ 0.71
SCAMP3-208ENST00000490999 FANCIQ9NVI1 1328 aa19.49■□□□□ 0.71
SCAMP3-208ENST00000490999 MAP3K9P80192 1104 aa19.48■□□□□ 0.71
SCAMP3-208ENST00000490999 IQSEC3Q9UPP2 1182 aaPredicted RBP19.48■□□□□ 0.71
SCAMP3-208ENST00000490999 SNCAIPQ9Y6H5 919 aa19.48■□□□□ 0.71
SCAMP3-208ENST00000490999 LACTBP83111 547 aaPredicted RBP19.47■□□□□ 0.71
SCAMP3-208ENST00000490999 ARHGEF6Q15052 776 aa19.47■□□□□ 0.71
SCAMP3-208ENST00000490999 CCDC57Q2TAC2 916 aa19.47■□□□□ 0.71
SCAMP3-208ENST00000490999 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
SCAMP3-208ENST00000490999 TDRD7Q8NHU6 1098 aaKnown RBP19.47■□□□□ 0.71
SCAMP3-208ENST00000490999 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
SCAMP3-208ENST00000490999 LAMA3Q16787 3333 aa19.47■□□□□ 0.71
SCAMP3-208ENST00000490999 SPDYE5A6NIY4 337 aa19.46■□□□□ 0.71
SCAMP3-208ENST00000490999 BTBD19C9JJ37 291 aa19.46■□□□□ 0.71
SCAMP3-208ENST00000490999 CHAF1AQ13111 956 aaPredicted RBP19.46■□□□□ 0.71
SCAMP3-208ENST00000490999 BEND3Q5T5X7 828 aa19.46■□□□□ 0.71
SCAMP3-208ENST00000490999 ZKSCAN4Q969J2 545 aaPredicted RBP19.46■□□□□ 0.71
SCAMP3-208ENST00000490999 WRNIP1Q96S55 665 aa19.46■□□□□ 0.71
SCAMP3-208ENST00000490999 TLR2O60603 784 aa19.45■□□□□ 0.7
SCAMP3-208ENST00000490999 HIBADHP31937 336 aaKnown RBP19.45■□□□□ 0.7
SCAMP3-208ENST00000490999 TNNI2P48788 182 aa19.45■□□□□ 0.7
SCAMP3-208ENST00000490999 MTFR1Q15390 333 aa19.45■□□□□ 0.7
SCAMP3-208ENST00000490999 FAM84BQ96KN1 310 aaPredicted RBP19.45■□□□□ 0.7
SCAMP3-208ENST00000490999 PUS3Q9BZE2 481 aaKnown RBP19.45■□□□□ 0.7
SCAMP3-208ENST00000490999 IRF6O14896 467 aa19.44■□□□□ 0.7
SCAMP3-208ENST00000490999 CTGFP29279 349 aa19.44■□□□□ 0.7
SCAMP3-208ENST00000490999 KIF22Q14807 665 aa19.44■□□□□ 0.7
SCAMP3-208ENST00000490999 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
SCAMP3-208ENST00000490999 GRM8O00222 908 aa19.43■□□□□ 0.7
SCAMP3-208ENST00000490999 CETPP11597 493 aa19.43■□□□□ 0.7
SCAMP3-208ENST00000490999 RBM27Q9P2N5 1060 aaKnown RBP19.43■□□□□ 0.7
SCAMP3-208ENST00000490999 CPA4Q9UI42 421 aa19.43■□□□□ 0.7
SCAMP3-208ENST00000490999 WDHD1O75717 1129 aaPredicted RBP19.42■□□□□ 0.7
SCAMP3-208ENST00000490999 SNAPC2Q13487 334 aa19.42■□□□□ 0.7
SCAMP3-208ENST00000490999 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
SCAMP3-208ENST00000490999 ERO1BQ86YB8 467 aa19.42■□□□□ 0.7
SCAMP3-208ENST00000490999 UBE4AQ14139 1066 aa19.41■□□□□ 0.7
SCAMP3-208ENST00000490999 DPF3Q92784 378 aa19.41■□□□□ 0.7
SCAMP3-208ENST00000490999 TRIM47Q96LD4 638 aa19.41■□□□□ 0.7
SCAMP3-208ENST00000490999 VAMP4O75379 141 aa19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 EXOSC9Q06265 439 aaKnown RBP19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 PPIL2Q13356 520 aa19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 VPS37DQ86XT2 251 aa19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 TEKT1Q969V4 418 aa19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 SUCLG2Q96I99 432 aa19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 SALL2Q9Y467 1007 aaPredicted RBP19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 IL16Q14005 1332 aa19.4■□□□□ 0.7
SCAMP3-208ENST00000490999 MIGA2Q7L4E1 593 aa19.39■□□□□ 0.69
SCAMP3-208ENST00000490999 C9orf78Q9NZ63 289 aaPredicted RBP19.39■□□□□ 0.69
SCAMP3-208ENST00000490999 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 OSBPP22059 807 aa19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 INPP5BP32019 993 aa19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 PSMC4P43686 418 aa19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 SLC4A10Q6U841 1118 aa19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 C17orf99Q6UX52 265 aa19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 TMOD2Q9NZR1 351 aa19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 SRRDQ9UH36 339 aa19.38■□□□□ 0.69
SCAMP3-208ENST00000490999 MYPNQ86TC9 1320 aa19.37■□□□□ 0.69
SCAMP3-208ENST00000490999 ADGRA2Q96PE1 1338 aa19.37■□□□□ 0.69
SCAMP3-208ENST00000490999 RAET1EQ8TD07 263 aa19.37■□□□□ 0.69
SCAMP3-208ENST00000490999 KAZALD1Q96I82 304 aa19.37■□□□□ 0.69
SCAMP3-208ENST00000490999 ZCCHC17Q9NP64 241 aaKnown RBP19.37■□□□□ 0.69
SCAMP3-208ENST00000490999 RIPOR2Q9Y4F9 1068 aa19.37■□□□□ 0.69
SCAMP3-208ENST00000490999 COL6A3P12111 3177 aa19.37■□□□□ 0.69
SCAMP3-208ENST00000490999 PDHXO00330 501 aa19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 FMNL1O95466 1100 aaPredicted RBP19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 GNRH1P01148 92 aa19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 CCL5P13501 91 aa19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 GRK4P32298 578 aa19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 LRRC24Q50LG9 513 aa19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 APOBEC3HQ6NTF7 200 aaKnown RBP19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 FBXO33Q7Z6M2 555 aa19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 ZDHHC15Q96MV8 337 aa19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
SCAMP3-208ENST00000490999 RPAP1Q9BWH6 1393 aaPredicted RBP19.35■□□□□ 0.69
SCAMP3-208ENST00000490999 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
SCAMP3-208ENST00000490999 PRMT2P55345 433 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms