RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 GLI3P10071 1580 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 BIN1O00499 593 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 PPFIA3O75145 1194 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 NLRP12P59046 1061 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 ST5P78524 1137 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 TTC5Q8N0Z6 440 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 SMARCE1Q969G3 411 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 NCOA5Q9HCD5 579 aaKnown RBP22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 PARP3Q9Y6F1 533 aa22.38■■□□□ 1.17
SNAPC3-206ENST00000490969 TOGARAM1Q9Y4F4 1720 aa22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 TBC1D8O95759 1140 aa22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 ATP5JP18859 108 aa22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 FANCCQ00597 558 aa22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 LAMA4Q16363 1823 aa22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 SASH3O75995 380 aa22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 SLC3A2P08195 630 aaKnown RBP22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 LMOD1P29536 600 aaPredicted RBP22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 OAS2P29728 719 aaKnown RBP22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 MCMDC2Q4G0Z9 681 aa22.37■■□□□ 1.17
SNAPC3-206ENST00000490969 PTCD1O75127 700 aaKnown RBP22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 EVCP57679 992 aa22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 LINC00301Q8NCQ3 95 aa22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 DDX21Q9NR30 783 aaKnown RBP eCLIP22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 NDUFB9Q9Y6M9 179 aa22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 RFX7Q2KHR2 1363 aa22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 SF3A1Q15459 793 aaKnown RBP22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 REXO1L1PQ8IX06 675 aa22.36■■□□□ 1.17
SNAPC3-206ENST00000490969 STK38Q15208 465 aa22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 CC2D1AQ6P1N0 951 aaPredicted RBP22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 KRBA2Q6ZNG9 492 aa22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 LRP10Q7Z4F1 713 aa22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 ZCCHC17Q9NP64 241 aaKnown RBP22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 DBNLQ9UJU6 430 aaKnown RBP22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 SNRPA1P09661 255 aaKnown RBP22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 GPS2Q13227 327 aa22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 AGXT2Q9BYV1 514 aa22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 CARMIL3Q8ND23 1372 aa22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 DISP2A7MBM2 1401 aa22.35■■□□□ 1.17
SNAPC3-206ENST00000490969 ATP1A3P13637 1013 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 EPC1Q9H2F5 836 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 TMX1Q9H3N1 280 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 ERVV-2B6SEH9 535 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 IKBKBO14920 756 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 EXOSC10Q01780 885 aaKnown RBP22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 SMC1AQ14683 1233 aaKnown RBP22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 KCNG4Q8TDN1 519 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 UTP14AQ9BVJ6 771 aaKnown RBP22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 CLIC4Q9Y696 253 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
SNAPC3-206ENST00000490969 XAGE3Q8WTP9 111 aa22.33■■□□□ 1.17
SNAPC3-206ENST00000490969 HSD3B7Q9H2F3 369 aa22.33■■□□□ 1.17
SNAPC3-206ENST00000490969 ZNF202O95125 648 aa22.32■■□□□ 1.16
SNAPC3-206ENST00000490969 GPR161Q8N6U8 529 aaKnown RBP22.32■■□□□ 1.16
SNAPC3-206ENST00000490969 ZSCAN12O43309 604 aa22.32■■□□□ 1.16
SNAPC3-206ENST00000490969 PDIA3P30101 505 aaKnown RBP22.32■■□□□ 1.16
SNAPC3-206ENST00000490969 COPS6Q7L5N1 327 aa22.32■■□□□ 1.16
SNAPC3-206ENST00000490969 FCHSD1Q86WN1 690 aa22.32■■□□□ 1.16
SNAPC3-206ENST00000490969 SPTLC2O15270 562 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 YEATS4O95619 227 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 FDPSP14324 419 aaKnown RBP22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 TNNI3KQ59H18 835 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 CCDC34Q96HJ3 373 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 MPHOSPH8Q99549 860 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 ASAP1Q9ULH1 1129 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 FPGT-TNNI3KV9GXZ4 949 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 VWA3AA6NCI4 1184 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 UBASH3AP57075 661 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 ZSCAN26Q16670 478 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 PIGBQ92521 554 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 DPF2Q92785 391 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 POLR3EQ9NVU0 708 aa22.31■■□□□ 1.16
SNAPC3-206ENST00000490969 NBPF26B4DH59 902 aa22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 CBFA2T2O43439 604 aa22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 DDX58O95786 925 aaKnown RBP22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 NBPF14Q5TI25 921 aa22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 NBPF10Q6P3W6 841 aaKnown RBP22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 NBPF15Q8N660 670 aa22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 ZNF274Q96GC6 653 aaPredicted RBP22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 KCPQ6ZWJ8 1503 aa22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 DDX46Q7L014 1031 aaKnown RBP22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 PLCD3Q8N3E9 789 aa22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 ARFGAP3Q9NP61 516 aa22.3■■□□□ 1.16
SNAPC3-206ENST00000490969 SERPINC1P01008 464 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 IGKV5-2P06315 115 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 EPHA10Q5JZY3 1008 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 ISM2Q6H9L7 571 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 FAM177A1Q8N128 213 aaPredicted RBP22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 PPP2R2CQ9Y2T4 447 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 SH3TC1Q8TE82 1336 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 A1BGP04217 495 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 POLR3DP05423 398 aaPredicted RBP22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 MAP3K9P80192 1104 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 GOLGA8FQ08AF8 430 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 GOLGA8DPQ0D2H9 430 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 OTUD7BQ6GQQ9 843 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 VSTM4Q8IW00 320 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 HAUS7Q99871 368 aa22.29■■□□□ 1.16
SNAPC3-206ENST00000490969 TFCP2Q12800 502 aa22.28■■□□□ 1.16
SNAPC3-206ENST00000490969 GNL2Q13823 731 aaKnown RBP22.28■■□□□ 1.16
SNAPC3-206ENST00000490969 CFAP100Q494V2 611 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms