RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 OPTNQ96CV9 577 aa10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 SLC10A4Q96EP9 437 aa10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 MS4A4AQ96JQ5 239 aa10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 FAM84BQ96KN1 310 aaPredicted RBP10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 TDRD3Q9H7E2 651 aaKnown RBP10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 ELP3Q9H9T3 547 aa10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 ZNF70Q9UC06 446 aaPredicted RBP10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 TTF2Q9UNY4 1162 aaKnown RBP10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 TRIOBPQ9H2D6 2365 aa10.68□□□□□ -0.7
PCOLCE-209ENST00000490909 MYO1BO43795 1136 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 CRKP46108 304 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 CACNB3P54284 484 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 VGLL4Q14135 290 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 UBE4AQ14139 1066 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 RABL6Q3YEC7 729 aaPredicted RBP10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 TAF7LQ5H9L4 462 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 ANKRD13AQ8IZ07 590 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 BRI3BPQ8WY22 251 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 BICC1Q9H694 974 aaKnown RBP10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 SERPINA10Q9UK55 444 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 IQSEC3Q9UPP2 1182 aaPredicted RBP10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 RIPOR2Q9Y4F9 1068 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 MGAMO43451 1857 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 PHIPQ8WWQ0 1821 aa10.67□□□□□ -0.7
PCOLCE-209ENST00000490909 LAMA3Q16787 3333 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 RPAP1Q9BWH6 1393 aaPredicted RBP10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 UNCXA6NJT0 531 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 TCP10L2B9ZVM9 353 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 ALDH1L1O75891 902 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 IREB2P48200 963 aaKnown RBP10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 RBM5P52756 815 aaKnown RBP eCLIP10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 SUPT20HL1Q3ZLR7 823 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 LRRC24Q50LG9 513 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 SLC4A10Q6U841 1118 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 KLHDC4Q8TBB5 520 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 ARMC5Q96C12 935 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 SRCIN1Q9C0H9 1055 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 PTPN22Q9Y2R2 807 aa10.66□□□□□ -0.7
PCOLCE-209ENST00000490909 AK9Q5TCS8 1911 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 MYH2Q9UKX2 1941 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 HIBADHP31937 336 aaKnown RBP10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 INHBEP58166 350 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 TNFAIP1Q13829 316 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 FAM43AQ8N2R8 423 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 ERO1AQ96HE7 468 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 C9orf78Q9NZ63 289 aaPredicted RBP10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 DOCK1Q14185 1865 aa10.65□□□□□ -0.7
PCOLCE-209ENST00000490909 CHAF1AQ13111 956 aaPredicted RBP10.64□□□□□ -0.71
PCOLCE-209ENST00000490909 FBXO33Q7Z6M2 555 aa10.64□□□□□ -0.71
PCOLCE-209ENST00000490909 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
PCOLCE-209ENST00000490909 RFX7Q2KHR2 1363 aa10.64□□□□□ -0.71
PCOLCE-209ENST00000490909 MROH5Q6ZUA9 1318 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 CCL15-CCL14A0A0B4J2E2 113 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 SP3Q02447 781 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 CCL15Q16663 113 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 MRPL50Q8N5N7 158 aaKnown RBP10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 ZNF333Q96JL9 665 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 ARHGAP39Q9C0H5 1083 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 EFCC1Q9HA90 598 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 PTCH2Q9Y6C5 1203 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 ATAD5Q96QE3 1844 aa10.63□□□□□ -0.71
PCOLCE-209ENST00000490909 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 FGFR2P21802 821 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 RFX5P48382 616 aaPredicted RBP10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 BCAMP50895 628 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 TAF1CQ15572 869 aaPredicted RBP10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 METTL24Q5JXM2 366 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 APOBEC3HQ6NTF7 200 aaKnown RBP10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 ZDHHC15Q96MV8 337 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 ATRNL1Q5VV63 1379 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 ALPK3Q96L96 1907 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
PCOLCE-209ENST00000490909 ADGRA2Q96PE1 1338 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 E9PSI1 815 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 IRF6O14896 467 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 PDE8BO95263 885 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 CTGFP29279 349 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 HNRNPUQ00839 825 aaKnown RBP eCLIP10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 ZKSCAN4Q969J2 545 aaPredicted RBP10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 TEKT1Q969V4 418 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 WRNIP1Q96S55 665 aa10.61□□□□□ -0.71
PCOLCE-209ENST00000490909 ZBED9Q6R2W3 1325 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 MAST2Q6P0Q8 1798 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 CDK5RAP2Q96SN8 1893 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 BTBD19C9JJ37 291 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 TNNI2P48788 182 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 GTF2A2P52657 109 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 MAP3K9P80192 1104 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 HDLBPQ00341 1268 aaKnown RBP10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 HABP4Q5JVS0 413 aaKnown RBP10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 OTUD7BQ6GQQ9 843 aa10.6□□□□□ -0.71
PCOLCE-209ENST00000490909 TBC1D22AQ8WUA7 517 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms