RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 USP44Q9H0E7 712 aa20.91■□□□□ 0.94
SRGAP3-209ENST00000490889 UNCXA6NJT0 531 aa20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 E9PSI1 815 aa20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 PDE8BO95263 885 aa20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 ALDH1A1P00352 501 aa20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 IREB2P48200 963 aaKnown RBP20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 INHBEP58166 350 aa20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 FBXO46Q6PJ61 603 aaPredicted RBP20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 ANKRD13AQ8IZ07 590 aa20.9■□□□□ 0.94
SRGAP3-209ENST00000490889 TCP10L2B9ZVM9 353 aa20.89■□□□□ 0.93
SRGAP3-209ENST00000490889 SLFN5Q08AF3 891 aa20.89■□□□□ 0.93
SRGAP3-209ENST00000490889 TNFAIP1Q13829 316 aa20.89■□□□□ 0.93
SRGAP3-209ENST00000490889 TMEM39BQ9GZU3 492 aa20.89■□□□□ 0.93
SRGAP3-209ENST00000490889 SLC34A2O95436 690 aa20.88■□□□□ 0.93
SRGAP3-209ENST00000490889 BCAMP50895 628 aa20.88■□□□□ 0.93
SRGAP3-209ENST00000490889 VPS37DQ86XT2 251 aa20.88■□□□□ 0.93
SRGAP3-209ENST00000490889 CDCA7LQ96GN5 454 aa20.88■□□□□ 0.93
SRGAP3-209ENST00000490889 PTPN18Q99952 460 aa20.88■□□□□ 0.93
SRGAP3-209ENST00000490889 ELP3Q9H9T3 547 aa20.88■□□□□ 0.93
SRGAP3-209ENST00000490889 FGFR2P21802 821 aa20.87■□□□□ 0.93
SRGAP3-209ENST00000490889 RFX5P48382 616 aaPredicted RBP20.87■□□□□ 0.93
SRGAP3-209ENST00000490889 CACNB3P54284 484 aa20.87■□□□□ 0.93
SRGAP3-209ENST00000490889 CAVIN4Q5BKX8 364 aa20.87■□□□□ 0.93
SRGAP3-209ENST00000490889 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.87■□□□□ 0.93
SRGAP3-209ENST00000490889 CNKSR2Q8WXI2 1034 aa20.87■□□□□ 0.93
SRGAP3-209ENST00000490889 CRHR2Q13324 411 aa20.86■□□□□ 0.93
SRGAP3-209ENST00000490889 OPTNQ96CV9 577 aa20.86■□□□□ 0.93
SRGAP3-209ENST00000490889 CENPFP49454 3210 aa20.85■□□□□ 0.93
SRGAP3-209ENST00000490889 TESPA1A2RU30 521 aaPredicted RBP20.85■□□□□ 0.93
SRGAP3-209ENST00000490889 FRAT2O75474 233 aaPredicted RBP20.85■□□□□ 0.93
SRGAP3-209ENST00000490889 HDLBPQ00341 1268 aaKnown RBP20.85■□□□□ 0.93
SRGAP3-209ENST00000490889 TBC1D22AQ8WUA7 517 aa20.85■□□□□ 0.93
SRGAP3-209ENST00000490889 CAP1Q01518 475 aa20.84■□□□□ 0.93
SRGAP3-209ENST00000490889 VGLL4Q14135 290 aa20.84■□□□□ 0.93
SRGAP3-209ENST00000490889 PUM3Q15397 648 aaKnown RBP20.84■□□□□ 0.93
SRGAP3-209ENST00000490889 OTOP1Q7RTM1 612 aa20.84■□□□□ 0.93
SRGAP3-209ENST00000490889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.84■□□□□ 0.93
SRGAP3-209ENST00000490889 MS4A4AQ96JQ5 239 aa20.84■□□□□ 0.93
SRGAP3-209ENST00000490889 TRIM17Q9Y577 477 aa20.84■□□□□ 0.93
SRGAP3-209ENST00000490889 EYA2O00167 538 aa20.83■□□□□ 0.93
SRGAP3-209ENST00000490889 TNNI2P48788 182 aa20.83■□□□□ 0.93
SRGAP3-209ENST00000490889 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
SRGAP3-209ENST00000490889 APOBEC3HQ6NTF7 200 aaKnown RBP20.83■□□□□ 0.93
SRGAP3-209ENST00000490889 TEKT1Q969V4 418 aa20.83■□□□□ 0.93
SRGAP3-209ENST00000490889 KIF16BQ96L93 1317 aa20.82■□□□□ 0.92
SRGAP3-209ENST00000490889 ATG9AQ7Z3C6 839 aa20.82■□□□□ 0.92
SRGAP3-209ENST00000490889 CD99L2Q8TCZ2 262 aa20.82■□□□□ 0.92
SRGAP3-209ENST00000490889 ZDHHC15Q96MV8 337 aa20.82■□□□□ 0.92
SRGAP3-209ENST00000490889 SMC4Q9NTJ3 1288 aa20.82■□□□□ 0.92
SRGAP3-209ENST00000490889 MYH13Q9UKX3 1938 aa20.82■□□□□ 0.92
SRGAP3-209ENST00000490889 IFIT1P09914 478 aaKnown RBP20.81■□□□□ 0.92
SRGAP3-209ENST00000490889 MAP3K9P80192 1104 aa20.81■□□□□ 0.92
SRGAP3-209ENST00000490889 TRMT2AQ8IZ69 625 aaKnown RBP20.81■□□□□ 0.92
SRGAP3-209ENST00000490889 BRI3BPQ8WY22 251 aa20.81■□□□□ 0.92
SRGAP3-209ENST00000490889 OTUD7BQ6GQQ9 843 aa20.8■□□□□ 0.92
SRGAP3-209ENST00000490889 MRIQ9BWK5 157 aa20.8■□□□□ 0.92
SRGAP3-209ENST00000490889 LPIN2Q92539 896 aa20.79■□□□□ 0.92
SRGAP3-209ENST00000490889 OTUD5Q96G74 571 aa20.79■□□□□ 0.92
SRGAP3-209ENST00000490889 ERO1AQ96HE7 468 aa20.79■□□□□ 0.92
SRGAP3-209ENST00000490889 SUGT1Q9Y2Z0 365 aa20.79■□□□□ 0.92
SRGAP3-209ENST00000490889 SNCAIPQ9Y6H5 919 aa20.79■□□□□ 0.92
SRGAP3-209ENST00000490889 BRCA2P51587 3418 aa20.79■□□□□ 0.92
SRGAP3-209ENST00000490889 MKI67P46013 3256 aaKnown RBP20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 CCL15-CCL14A0A0B4J2E2 113 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 SLC5A1P13866 664 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 CCL15Q16663 113 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 FAM83AQ86UY5 434 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 FAM43AQ8N2R8 423 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 SIL1Q9H173 461 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 PTPN22Q9Y2R2 807 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 CSADQ9Y600 493 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 MAST3O60307 1309 aa20.78■□□□□ 0.92
SRGAP3-209ENST00000490889 SPDYE5A6NIY4 337 aa20.77■□□□□ 0.92
SRGAP3-209ENST00000490889 SP3Q02447 781 aa20.77■□□□□ 0.92
SRGAP3-209ENST00000490889 FKBP1CQ5VVH2 108 aa20.77■□□□□ 0.92
SRGAP3-209ENST00000490889 HHIPL2Q6UWX4 724 aa20.77■□□□□ 0.92
SRGAP3-209ENST00000490889 TMOD2Q9NZR1 351 aa20.77■□□□□ 0.92
SRGAP3-209ENST00000490889 NOB1Q9ULX3 412 aaKnown RBP20.77■□□□□ 0.92
SRGAP3-209ENST00000490889 RPAP1Q9BWH6 1393 aaPredicted RBP20.76■□□□□ 0.91
SRGAP3-209ENST00000490889 UBTFL1P0CB47 393 aaPredicted RBP20.76■□□□□ 0.91
SRGAP3-209ENST00000490889 GTF2A2P52657 109 aa20.76■□□□□ 0.91
SRGAP3-209ENST00000490889 ZKSCAN4Q969J2 545 aaPredicted RBP20.76■□□□□ 0.91
SRGAP3-209ENST00000490889 WRNIP1Q96S55 665 aa20.76■□□□□ 0.91
SRGAP3-209ENST00000490889 POTEFA5A3E0 1075 aa20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 PRDX5P30044 214 aa20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 TAF1CQ15572 869 aaPredicted RBP20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 DIXDC1Q155Q3 683 aa20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 PRPF38BQ5VTL8 546 aaKnown RBP20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 WDR66Q8TBY9 1149 aa20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 EFCC1Q9HA90 598 aa20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 PA2G4Q9UQ80 394 aaKnown RBP20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 DAGLAQ9Y4D2 1042 aa20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 LRRFIP2Q9Y608 721 aaKnown RBP20.75■□□□□ 0.91
SRGAP3-209ENST00000490889 CIAO1O76071 339 aa20.74■□□□□ 0.91
SRGAP3-209ENST00000490889 ATP2B3Q16720 1220 aa20.74■□□□□ 0.91
SRGAP3-209ENST00000490889 MIGA2Q7L4E1 593 aa20.74■□□□□ 0.91
SRGAP3-209ENST00000490889 ZSWIM8A7E2V4 1837 aa20.74■□□□□ 0.91
SRGAP3-209ENST00000490889 IRF6O14896 467 aa20.73■□□□□ 0.91
SRGAP3-209ENST00000490889 NFIAQ12857 509 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms