RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 CLMNQ96JQ2 1002 aa24.66■■□□□ 1.54
SREBF1-216ENST00000490796 TCP10L2B9ZVM9 353 aa24.65■■□□□ 1.54
SREBF1-216ENST00000490796 BCAMP50895 628 aa24.65■■□□□ 1.54
SREBF1-216ENST00000490796 ANKRD13AQ8IZ07 590 aa24.65■■□□□ 1.54
SREBF1-216ENST00000490796 VGLL2Q8N8G2 317 aa24.65■■□□□ 1.54
SREBF1-216ENST00000490796 HDAC5Q9UQL6 1122 aa24.65■■□□□ 1.54
SREBF1-216ENST00000490796 SSC5DA1L4H1 1573 aa24.64■■□□□ 1.54
SREBF1-216ENST00000490796 EYA2O00167 538 aa24.64■■□□□ 1.54
SREBF1-216ENST00000490796 SLC5A1P13866 664 aa24.64■■□□□ 1.54
SREBF1-216ENST00000490796 HDLBPQ00341 1268 aaKnown RBP24.64■■□□□ 1.54
SREBF1-216ENST00000490796 NOM1Q5C9Z4 860 aaKnown RBP24.64■■□□□ 1.54
SREBF1-216ENST00000490796 TEKT1Q969V4 418 aa24.64■■□□□ 1.54
SREBF1-216ENST00000490796 API5Q9BZZ5 524 aaKnown RBP24.64■■□□□ 1.54
SREBF1-216ENST00000490796 TMOD2Q9NZR1 351 aa24.64■■□□□ 1.54
SREBF1-216ENST00000490796 FKTNO75072 461 aa24.63■■□□□ 1.53
SREBF1-216ENST00000490796 USP2O75604 605 aaPredicted RBP24.63■■□□□ 1.53
SREBF1-216ENST00000490796 OTUD7BQ6GQQ9 843 aa24.63■■□□□ 1.53
SREBF1-216ENST00000490796 NOB1Q9ULX3 412 aaKnown RBP24.63■■□□□ 1.53
SREBF1-216ENST00000490796 MAST3O60307 1309 aa24.62■■□□□ 1.53
SREBF1-216ENST00000490796 KIF16BQ96L93 1317 aa24.62■■□□□ 1.53
SREBF1-216ENST00000490796 IFNL1Q8IU54 200 aa24.62■■□□□ 1.53
SREBF1-216ENST00000490796 LPIN2Q92539 896 aa24.62■■□□□ 1.53
SREBF1-216ENST00000490796 TRMT2AQ8IZ69 625 aaKnown RBP24.61■■□□□ 1.53
SREBF1-216ENST00000490796 CFHR5Q9BXR6 569 aa24.61■■□□□ 1.53
SREBF1-216ENST00000490796 CCER2I3L3R5 266 aa24.6■■□□□ 1.53
SREBF1-216ENST00000490796 SOX10P56693 466 aa24.6■■□□□ 1.53
SREBF1-216ENST00000490796 GRIK5Q16478 980 aa24.6■■□□□ 1.53
SREBF1-216ENST00000490796 TMEM39BQ9GZU3 492 aa24.6■■□□□ 1.53
SREBF1-216ENST00000490796 SIL1Q9H173 461 aa24.6■■□□□ 1.53
SREBF1-216ENST00000490796 HPS5Q9UPZ3 1129 aa24.6■■□□□ 1.53
SREBF1-216ENST00000490796 SUGT1Q9Y2Z0 365 aa24.6■■□□□ 1.53
SREBF1-216ENST00000490796 FGFR2P21802 821 aa24.59■■□□□ 1.53
SREBF1-216ENST00000490796 RFX5P48382 616 aaPredicted RBP24.59■■□□□ 1.53
SREBF1-216ENST00000490796 ELP3Q9H9T3 547 aa24.59■■□□□ 1.53
SREBF1-216ENST00000490796 CEP126Q9P2H0 1117 aa24.59■■□□□ 1.53
SREBF1-216ENST00000490796 ARAP2Q8WZ64 1704 aa24.58■■□□□ 1.53
SREBF1-216ENST00000490796 WDR66Q8TBY9 1149 aa24.58■■□□□ 1.53
SREBF1-216ENST00000490796 GNL3LQ9NVN8 582 aaKnown RBP24.58■■□□□ 1.53
SREBF1-216ENST00000490796 FBXO3Q9UK99 471 aa24.58■■□□□ 1.53
SREBF1-216ENST00000490796 CSADQ9Y600 493 aa24.58■■□□□ 1.53
SREBF1-216ENST00000490796 OPTNQ96CV9 577 aa24.57■■□□□ 1.52
SREBF1-216ENST00000490796 HOOK2Q96ED9 719 aa24.57■■□□□ 1.52
SREBF1-216ENST00000490796 ZDHHC15Q96MV8 337 aa24.57■■□□□ 1.52
SREBF1-216ENST00000490796 MRIQ9BWK5 157 aa24.57■■□□□ 1.52
SREBF1-216ENST00000490796 R3HDMLQ9H3Y0 253 aa24.57■■□□□ 1.52
SREBF1-216ENST00000490796 CACNB3P54284 484 aa24.56■■□□□ 1.52
SREBF1-216ENST00000490796 MAP3K9P80192 1104 aa24.56■■□□□ 1.52
SREBF1-216ENST00000490796 ATP2B3Q16720 1220 aa24.56■■□□□ 1.52
SREBF1-216ENST00000490796 TEPSINQ96N21 525 aa24.56■■□□□ 1.52
SREBF1-216ENST00000490796 LRRFIP2Q9Y608 721 aaKnown RBP24.56■■□□□ 1.52
SREBF1-216ENST00000490796 IGF2BP3O00425 579 aaKnown RBP eCLIP24.55■■□□□ 1.52
SREBF1-216ENST00000490796 CIAO1O76071 339 aa24.55■■□□□ 1.52
SREBF1-216ENST00000490796 FBXO46Q6PJ61 603 aaPredicted RBP24.55■■□□□ 1.52
SREBF1-216ENST00000490796 ATG9AQ7Z3C6 839 aa24.55■■□□□ 1.52
SREBF1-216ENST00000490796 CDAN1Q8IWY9 1227 aa24.55■■□□□ 1.52
SREBF1-216ENST00000490796 GJA5P36382 358 aa24.54■■□□□ 1.52
SREBF1-216ENST00000490796 HHIPL2Q6UWX4 724 aa24.54■■□□□ 1.52
SREBF1-216ENST00000490796 IL15P40933 162 aaPredicted RBP24.53■■□□□ 1.52
SREBF1-216ENST00000490796 RARSP54136 660 aaKnown RBP24.53■■□□□ 1.52
SREBF1-216ENST00000490796 FKBP1CQ5VVH2 108 aa24.53■■□□□ 1.52
SREBF1-216ENST00000490796 FAM83AQ86UY5 434 aa24.53■■□□□ 1.52
SREBF1-216ENST00000490796 VGLL4Q14135 290 aa24.52■■□□□ 1.52
SREBF1-216ENST00000490796 APOBEC3HQ6NTF7 200 aaKnown RBP24.52■■□□□ 1.52
SREBF1-216ENST00000490796 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.52■■□□□ 1.52
SREBF1-216ENST00000490796 TRIM17Q9Y577 477 aa24.52■■□□□ 1.52
SREBF1-216ENST00000490796 GTF2A2P52657 109 aa24.51■■□□□ 1.51
SREBF1-216ENST00000490796 CRHR2Q13324 411 aa24.51■■□□□ 1.51
SREBF1-216ENST00000490796 DCAF15Q66K64 600 aa24.51■■□□□ 1.51
SREBF1-216ENST00000490796 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.51■■□□□ 1.51
SREBF1-216ENST00000490796 ERO1AQ96HE7 468 aa24.51■■□□□ 1.51
SREBF1-216ENST00000490796 PDE4DIPQ5VU43 2346 aa24.5■■□□□ 1.51
SREBF1-216ENST00000490796 TESPA1A2RU30 521 aaPredicted RBP24.5■■□□□ 1.51
SREBF1-216ENST00000490796 IPO8O15397 1037 aaKnown RBP24.5■■□□□ 1.51
SREBF1-216ENST00000490796 WDHD1O75717 1129 aaPredicted RBP24.5■■□□□ 1.51
SREBF1-216ENST00000490796 LDHBP07195 334 aaKnown RBP24.5■■□□□ 1.51
SREBF1-216ENST00000490796 GNAI3P08754 354 aa24.5■■□□□ 1.51
SREBF1-216ENST00000490796 ARHGAP45Q92619 1136 aa24.5■■□□□ 1.51
SREBF1-216ENST00000490796 OTUD5Q96G74 571 aa24.5■■□□□ 1.51
SREBF1-216ENST00000490796 WRNIP1Q96S55 665 aa24.5■■□□□ 1.51
SREBF1-216ENST00000490796 MEIS3Q99687 375 aa24.5■■□□□ 1.51
SREBF1-216ENST00000490796 PA2G4Q9UQ80 394 aaKnown RBP24.5■■□□□ 1.51
SREBF1-216ENST00000490796 CCL15-CCL14A0A0B4J2E2 113 aa24.49■■□□□ 1.51
SREBF1-216ENST00000490796 CCL15Q16663 113 aa24.49■■□□□ 1.51
SREBF1-216ENST00000490796 DENND2AQ9ULE3 1009 aa24.49■■□□□ 1.51
SREBF1-216ENST00000490796 SEMA3EO15041 775 aa24.48■■□□□ 1.51
SREBF1-216ENST00000490796 CNKSR2Q8WXI2 1034 aa24.48■■□□□ 1.51
SREBF1-216ENST00000490796 PTPN18Q99952 460 aa24.48■■□□□ 1.51
SREBF1-216ENST00000490796 COPRSQ9NQ92 184 aa24.48■■□□□ 1.51
SREBF1-216ENST00000490796 ZFYVE28Q9HCC9 887 aa24.47■■□□□ 1.51
SREBF1-216ENST00000490796 MYH13Q9UKX3 1938 aa24.47■■□□□ 1.51
SREBF1-216ENST00000490796 OTOFQ9HC10 1997 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 SRGAP3O43295 1099 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 PRDX5P30044 214 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 SP3Q02447 781 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 TAF1CQ15572 869 aaPredicted RBP24.46■■□□□ 1.51
SREBF1-216ENST00000490796 DIXDC1Q155Q3 683 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 INTS3Q68E01 1043 aaKnown RBP24.46■■□□□ 1.51
SREBF1-216ENST00000490796 OTOP1Q7RTM1 612 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 ERO1BQ86YB8 467 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 ZGPATQ8N5A5 531 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms