RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 EFCAB8A8MWE9 144 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 PFKFB2O60825 505 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 CDC25BP30305 580 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 SLC4A8Q2Y0W8 1093 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 GPR161Q8N6U8 529 aaKnown RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 KRI1Q8N9T8 703 aaKnown RBP14.63□□□□□ -0.07
SHOX2-205ENST00000490689 GOLPH3LQ9H4A5 285 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 TAF6LQ9Y6J9 622 aa14.63□□□□□ -0.07
SHOX2-205ENST00000490689 UNC13BO14795 1591 aa14.62□□□□□ -0.07
SHOX2-205ENST00000490689 SNRPA1P09661 255 aaKnown RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 PLEKHA4Q9H4M7 779 aa14.62□□□□□ -0.07
SHOX2-205ENST00000490689 DBNLQ9UJU6 430 aaKnown RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 PSDA5PKW4 1024 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 RNMTO43148 476 aaKnown RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 CTIFO43310 598 aaKnown RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 TRIM21P19474 475 aaKnown RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 SASH1O94885 1247 aa14.62□□□□□ -0.07
SHOX2-205ENST00000490689 IRX5P78411 483 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 KRT40Q6A162 431 aa14.62□□□□□ -0.07
SHOX2-205ENST00000490689 IQSEC3Q9UPP2 1182 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-205ENST00000490689 CCDC196A0A1B0GTZ2 297 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 A0A1B0GUL7 405 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 CDK5RAP3Q96JB5 506 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 PNPLA6Q8IY17 1366 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 PDIA3P30101 505 aaKnown RBP14.61□□□□□ -0.07
SHOX2-205ENST00000490689 MTIF2P46199 727 aaKnown RBP14.61□□□□□ -0.07
SHOX2-205ENST00000490689 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 GIMAP7Q8NHV1 300 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 CEP89Q96ST8 783 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 EBAG9O00559 213 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 COBLO75128 1261 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 CHGBP05060 677 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 IL15P40933 162 aaPredicted RBP14.61□□□□□ -0.07
SHOX2-205ENST00000490689 PIP4K2BP78356 416 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 GCKRQ14397 625 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 SPECC1LQ69YQ0 1117 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 MFSD6Q6ZSS7 791 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 SLF1Q9BQI6 1058 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 CABP5Q9NP86 173 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 SBNO1A3KN83 1393 aa14.61□□□□□ -0.07
SHOX2-205ENST00000490689 ATP5JP18859 108 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 PAFAH1B1P43034 410 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 HLTFQ14527 1009 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHOX2-205ENST00000490689 KANK3Q6NY19 840 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 KCNJ14Q9UNX9 436 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 POLA2Q14181 598 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 TDRD12Q587J7 1177 aaKnown RBP14.6□□□□□ -0.07
SHOX2-205ENST00000490689 HELBQ8NG08 1087 aaPredicted RBP14.6□□□□□ -0.07
SHOX2-205ENST00000490689 PCDHA5Q9Y5H7 936 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 KAT6BQ8WYB5 2073 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 MCM3P25205 808 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 CHRNA2Q15822 529 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 LONRF2Q1L5Z9 754 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 TRIM47Q96LD4 638 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 PLIN2Q99541 437 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 PARD6BQ9BYG5 372 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 ABCA6Q8N139 1617 aa14.6□□□□□ -0.07
SHOX2-205ENST00000490689 LAMC1P11047 1609 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 NLRP5P59047 1200 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 RTN1Q16799 776 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 SLFN14P0C7P3 912 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 UBXN1Q04323 297 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 CCDC96Q2M329 555 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 PSMB7Q99436 277 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 KIF1BO60333 1816 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 PRR36Q9H6K5 1346 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 hCG_1642624A0A1W2PR95 340 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 HSPD1P10809 573 aaKnown RBP14.59□□□□□ -0.07
SHOX2-205ENST00000490689 WTAPQ15007 396 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 TAX1BP1Q86VP1 789 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 CMTR1Q8N1G2 835 aaKnown RBP14.59□□□□□ -0.07
SHOX2-205ENST00000490689 ATRIPQ8WXE1 791 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 MACROD2A1Z1Q3 448 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 CCDC122Q5T0U0 273 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
SHOX2-205ENST00000490689 HELLSQ9NRZ9 838 aa14.59□□□□□ -0.07
SHOX2-205ENST00000490689 AKR1B10O60218 316 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 MAP3K12Q12852 859 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 WWC2Q6AWC2 1192 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 AIFM3Q96NN9 605 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 NAPGQ99747 312 aaPredicted RBP14.58□□□□□ -0.08
SHOX2-205ENST00000490689 SERTAD1Q9UHV2 236 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 AATKQ6ZMQ8 1374 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 TRIM75PA6NK02 468 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 MYO1BO43795 1136 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 GIGYF1O75420 1035 aaPredicted RBP14.58□□□□□ -0.08
SHOX2-205ENST00000490689 CACNA2D4Q7Z3S7 1137 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 MAATS1Q7Z4T9 603 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 DIS3L2Q8IYB7 885 aaKnown RBP14.58□□□□□ -0.08
SHOX2-205ENST00000490689 PLCD4Q9BRC7 762 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 ADCY9O60503 1353 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 FBXO18Q8NFZ0 1043 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 CTAGE1Q96RT6 745 aa14.58□□□□□ -0.08
SHOX2-205ENST00000490689 LINC00301Q8NCQ3 95 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 AFAP1L1Q8TED9 768 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 CDC42BPBQ9Y5S2 1711 aa14.57□□□□□ -0.08
SHOX2-205ENST00000490689 USO1O60763 962 aaKnown RBP14.57□□□□□ -0.08
SHOX2-205ENST00000490689 ZFYP08048 801 aaPredicted RBP14.57□□□□□ -0.08
SHOX2-205ENST00000490689 IQCB1Q15051 598 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms