RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.16
RIPPLY3-203ENST00000490393 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
RIPPLY3-203ENST00000490393 MTMR6Q9Y217 621 aa16.08■□□□□ 0.16
RIPPLY3-203ENST00000490393 ATP6V1DQ9Y5K8 247 aa16.08■□□□□ 0.16
RIPPLY3-203ENST00000490393 APPP05067 770 aa16.07■□□□□ 0.16
RIPPLY3-203ENST00000490393 CYP7A1P22680 504 aa16.07■□□□□ 0.16
RIPPLY3-203ENST00000490393 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
RIPPLY3-203ENST00000490393 RPGRQ92834 1020 aaKnown RBP16.07■□□□□ 0.16
RIPPLY3-203ENST00000490393 LRRC2Q9BYS8 371 aa16.07■□□□□ 0.16
RIPPLY3-203ENST00000490393 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
RIPPLY3-203ENST00000490393 XDHP47989 1333 aa16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 F13A1P00488 732 aa16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 KLRK1P26718 216 aa16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 TRDNQ13061 729 aa16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 NACAP1Q9BZK3 213 aa16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 ARMT1Q9H993 441 aa16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 EPB41L4AQ9HCS5 686 aaPredicted RBP16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 ABCF2Q9UG63 623 aa16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 IQSEC3Q9UPP2 1182 aaPredicted RBP16.06■□□□□ 0.16
RIPPLY3-203ENST00000490393 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 PDIA3P30101 505 aaKnown RBP16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 SCRN1Q12765 414 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 FOXD4L5Q5VV16 416 aaPredicted RBP16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 RALYLQ86SE5 291 aaKnown RBP16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 FOXD4L4Q8WXT5 416 aaPredicted RBP16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 RAI14Q9P0K7 980 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 PRC1O43663 620 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 APOBRQ0VD83 1088 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 STK3Q13188 491 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 TMC4Q7Z404 712 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 COL23A1Q86Y22 540 aaPredicted RBP16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 NAPBQ9H115 298 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 ANKIB1Q9P2G1 1089 aa16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
RIPPLY3-203ENST00000490393 SALL1Q9NSC2 1324 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 MAGEB6P1A0A0J9YX57 407 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 ANTXR2P58335 489 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 TXNRD3Q86VQ6 643 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 TMEM87AQ8NBN3 555 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 TDRD7Q8NHU6 1098 aaKnown RBP16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 SLC4A4Q9Y6R1 1079 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 RGPD3A6NKT7 1758 aaPredicted RBP16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 RGPD4Q7Z3J3 1758 aa16.04■□□□□ 0.16
RIPPLY3-203ENST00000490393 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 TBC1D10CQ8IV04 446 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 NSUN4Q96CB9 384 aaKnown RBP16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 CNNM2Q9H8M5 875 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 NRXN2Q9P2S2 1712 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 MYH13Q9UKX3 1938 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 SPTY2D1Q68D10 685 aaPredicted RBP16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 NAA16Q6N069 864 aaPredicted RBP16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 CHST3Q7LGC8 479 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 TMEM87BQ96K49 555 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 ANAPC4Q9UJX5 808 aa16.03■□□□□ 0.16
RIPPLY3-203ENST00000490393 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
RIPPLY3-203ENST00000490393 PRKAB2O43741 272 aa16.02■□□□□ 0.16
RIPPLY3-203ENST00000490393 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
RIPPLY3-203ENST00000490393 STAG1Q8WVM7 1258 aa16.02■□□□□ 0.16
RIPPLY3-203ENST00000490393 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
RIPPLY3-203ENST00000490393 CTDNEP1O95476 244 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 MBD3O95983 291 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 GPSM2P81274 684 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 MIGA1Q8NAN2 632 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 WDR66Q8TBY9 1149 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 KRT23Q9C075 422 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 TIAM2Q8IVF5 1701 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 JAK2O60674 1132 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 MECOMQ03112 1051 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 ZNF804AQ7Z570 1209 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 SP8Q8IXZ3 490 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 RGS22Q8NE09 1264 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 CHAMP1Q96JM3 812 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 KIF3AQ9Y496 699 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 TCHHQ07283 1943 aa16.01■□□□□ 0.15
RIPPLY3-203ENST00000490393 DHX16O60231 1041 aaKnown RBP16■□□□□ 0.15
RIPPLY3-203ENST00000490393 TDO2P48775 406 aa16■□□□□ 0.15
RIPPLY3-203ENST00000490393 CYB5R4Q7L1T6 521 aa16■□□□□ 0.15
RIPPLY3-203ENST00000490393 GPT2Q8TD30 523 aa16■□□□□ 0.15
RIPPLY3-203ENST00000490393 IGDCC4Q8TDY8 1250 aa16■□□□□ 0.15
RIPPLY3-203ENST00000490393 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
RIPPLY3-203ENST00000490393 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
RIPPLY3-203ENST00000490393 ANGEL1Q9UNK9 670 aaKnown RBP16■□□□□ 0.15
RIPPLY3-203ENST00000490393 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
RIPPLY3-203ENST00000490393 SH2B2O14492 632 aaPredicted RBP15.99■□□□□ 0.15
RIPPLY3-203ENST00000490393 LIFRP42702 1097 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms