RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 HUNKP57058 714 aa20.94■□□□□ 0.94
RAPGEF3-212ENST00000490387 GTF2IP78347 998 aa20.94■□□□□ 0.94
RAPGEF3-212ENST00000490387 NUCB1Q02818 461 aa20.94■□□□□ 0.94
RAPGEF3-212ENST00000490387 ZNF804AQ7Z570 1209 aa20.94■□□□□ 0.94
RAPGEF3-212ENST00000490387 NEUROD6Q96NK8 337 aa20.94■□□□□ 0.94
RAPGEF3-212ENST00000490387 DBNDD2Q9BQY9 259 aa20.94■□□□□ 0.94
RAPGEF3-212ENST00000490387 GBA2Q9HCG7 927 aaPredicted RBP20.94■□□□□ 0.94
RAPGEF3-212ENST00000490387 AOC2O75106 756 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 PHKA1P46020 1223 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 CAVIN4Q5BKX8 364 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 ANKRD45Q5TZF3 282 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 C2orf69Q8N8R5 385 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 TDRD7Q8NHU6 1098 aaKnown RBP20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 CCDC136Q96JN2 1154 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 BEGAINQ9BUH8 593 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 CCDC8Q9H0W5 538 aaPredicted RBP20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 PITPNM2Q9BZ72 1349 aa20.93■□□□□ 0.94
RAPGEF3-212ENST00000490387 AKAP11Q9UKA4 1901 aa20.92■□□□□ 0.94
RAPGEF3-212ENST00000490387 MAP2K2P36507 400 aa20.92■□□□□ 0.94
RAPGEF3-212ENST00000490387 CCDC102BQ68D86 513 aa20.92■□□□□ 0.94
RAPGEF3-212ENST00000490387 CDCA5Q96FF9 252 aa20.92■□□□□ 0.94
RAPGEF3-212ENST00000490387 PRDM10Q9NQV6 1147 aa20.92■□□□□ 0.94
RAPGEF3-212ENST00000490387 HDAC9Q9UKV0 1011 aa20.92■□□□□ 0.94
RAPGEF3-212ENST00000490387 COL1A1P02452 1464 aaPredicted RBP20.91■□□□□ 0.94
RAPGEF3-212ENST00000490387 MMP14P50281 582 aa20.91■□□□□ 0.94
RAPGEF3-212ENST00000490387 LBX1P52954 281 aa20.91■□□□□ 0.94
RAPGEF3-212ENST00000490387 CENPQQ7L2Z9 268 aaPredicted RBP20.91■□□□□ 0.94
RAPGEF3-212ENST00000490387 KIAA0825Q8IV33 1275 aa20.91■□□□□ 0.94
RAPGEF3-212ENST00000490387 SALL3Q9BXA9 1300 aa20.91■□□□□ 0.94
RAPGEF3-212ENST00000490387 NBPF9Q3BBW0 867 aa20.9■□□□□ 0.94
RAPGEF3-212ENST00000490387 B4GALNT3Q6L9W6 998 aa20.9■□□□□ 0.94
RAPGEF3-212ENST00000490387 CHD1LQ86WJ1 897 aa20.9■□□□□ 0.94
RAPGEF3-212ENST00000490387 WNT10BO00744 389 aa20.89■□□□□ 0.93
RAPGEF3-212ENST00000490387 IFIT2P09913 472 aaKnown RBP20.89■□□□□ 0.93
RAPGEF3-212ENST00000490387 HSPA8P11142 646 aaKnown RBP20.89■□□□□ 0.93
RAPGEF3-212ENST00000490387 ARID4AP29374 1257 aaPredicted RBP20.89■□□□□ 0.93
RAPGEF3-212ENST00000490387 VPS37DQ86XT2 251 aa20.89■□□□□ 0.93
RAPGEF3-212ENST00000490387 ZNF512BQ96KM6 892 aaPredicted RBP20.89■□□□□ 0.93
RAPGEF3-212ENST00000490387 RGMBQ6NW40 437 aa20.88■□□□□ 0.93
RAPGEF3-212ENST00000490387 OTUD7AQ8TE49 926 aaPredicted RBP20.88■□□□□ 0.93
RAPGEF3-212ENST00000490387 LNPKQ9C0E8 428 aa20.88■□□□□ 0.93
RAPGEF3-212ENST00000490387 SCAF8Q9UPN6 1271 aaKnown RBP20.88■□□□□ 0.93
RAPGEF3-212ENST00000490387 PDS5AQ29RF7 1337 aaKnown RBP20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 FAM205AQ6ZU69 1335 aa20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 SEMA3EO15041 775 aa20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 NOGQ13253 232 aa20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 RASGRF1Q13972 1273 aa20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 GORABQ5T7V8 394 aa20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 GNL3LQ9NVN8 582 aaKnown RBP20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 PAPPA2Q9BXP8 1791 aa20.87■□□□□ 0.93
RAPGEF3-212ENST00000490387 CCDC158Q5M9N0 1113 aa20.86■□□□□ 0.93
RAPGEF3-212ENST00000490387 IQSEC3Q9UPP2 1182 aaPredicted RBP20.86■□□□□ 0.93
RAPGEF3-212ENST00000490387 ECM29Q5VYK3 1845 aa20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 UQCRFS1P1P0C7P4 283 aa20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 MCAMP43121 646 aa20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 ZNF157P51786 506 aaPredicted RBP20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 CERS5Q8N5B7 392 aa20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 CCDC102AQ96A19 550 aa20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 JAG2Q9Y219 1238 aa20.85■□□□□ 0.93
RAPGEF3-212ENST00000490387 F8W031 263 aaPredicted RBP20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 CAPN15O75808 1086 aa20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 PDE4AP27815 886 aa20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 FKBP1AP62942 108 aaKnown RBP20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 FKBP1BP68106 108 aa20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 TTC39AQ5SRH9 613 aa20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 APOBEC3FQ8IUX4 373 aaKnown RBP20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 HMG20BQ9P0W2 317 aa20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 STAP2Q9UGK3 403 aa20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 DENND2AQ9ULE3 1009 aa20.84■□□□□ 0.93
RAPGEF3-212ENST00000490387 TTC41PQ6P2S7 1318 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 CA12O43570 354 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 ATP5JP18859 108 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 MX1P20591 662 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 DLGAP5Q15398 846 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 PRAMEF18Q5VWM3 479 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 PI16Q6UXB8 463 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 ECHDC1Q9NTX5 307 aa20.83■□□□□ 0.93
RAPGEF3-212ENST00000490387 FAM155AB1AL88 458 aaPredicted RBP20.82■□□□□ 0.92
RAPGEF3-212ENST00000490387 NF2P35240 595 aa20.82■□□□□ 0.92
RAPGEF3-212ENST00000490387 SPATA5Q8NB90 893 aa20.82■□□□□ 0.92
RAPGEF3-212ENST00000490387 ZBED3Q96IU2 234 aaPredicted RBP20.82■□□□□ 0.92
RAPGEF3-212ENST00000490387 ZIC5Q96T25 663 aa20.82■□□□□ 0.92
RAPGEF3-212ENST00000490387 TSKSQ9UJT2 592 aa20.82■□□□□ 0.92
RAPGEF3-212ENST00000490387 SALL1Q9NSC2 1324 aa20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 DOCK2Q92608 1830 aa20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 FRAT2O75474 233 aaPredicted RBP20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 PDE1AP54750 535 aa20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 TTLL12Q14166 644 aaPredicted RBP20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 TSHZ3Q63HK5 1081 aa20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 PLEKHM2Q8IWE5 1019 aa20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 PI4K2BQ8TCG2 481 aa20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 MYO5AQ9Y4I1 1855 aaKnown RBP20.81■□□□□ 0.92
RAPGEF3-212ENST00000490387 MYO1BO43795 1136 aa20.8■□□□□ 0.92
RAPGEF3-212ENST00000490387 SLC10A3P09131 477 aa20.8■□□□□ 0.92
RAPGEF3-212ENST00000490387 CHAF1AQ13111 956 aaPredicted RBP20.8■□□□□ 0.92
RAPGEF3-212ENST00000490387 CFAP100Q494V2 611 aa20.8■□□□□ 0.92
RAPGEF3-212ENST00000490387 MFSD14BQ5SR56 506 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms