RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 ZNF384Q8TF68 577 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 GCC1Q96CN9 775 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 SERPINA10Q9UK55 444 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 CYP2E1P05181 493 aaPredicted RBP17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 ZAP70P43403 619 aa17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 CRKP46108 304 aa17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 DLK2Q6UY11 383 aa17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 OTUD7AQ8TE49 926 aaPredicted RBP17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 PRMT6Q96LA8 375 aaPredicted RBP17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 GGA3Q9NZ52 723 aa17.61■□□□□ 0.41
SRGAP3-208ENST00000490348 LDHBP07195 334 aaKnown RBP17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 FMR1Q06787 632 aaKnown RBP eCLIP17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 DLGAP5Q15398 846 aa17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 ANGEL2Q5VTE6 544 aaKnown RBP17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 ABCF2Q9UG63 623 aa17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 SCAF8Q9UPN6 1271 aaKnown RBP17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 PASKQ96RG2 1323 aa17.6■□□□□ 0.41
SRGAP3-208ENST00000490348 TRAF5O00463 557 aa17.59■□□□□ 0.41
SRGAP3-208ENST00000490348 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
SRGAP3-208ENST00000490348 MRIQ9BWK5 157 aa17.59■□□□□ 0.41
SRGAP3-208ENST00000490348 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
SRGAP3-208ENST00000490348 PIH1D3Q9NQM4 214 aaKnown RBP17.59■□□□□ 0.41
SRGAP3-208ENST00000490348 POLR2AP24928 1970 aaKnown RBP17.59■□□□□ 0.41
SRGAP3-208ENST00000490348 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.41
SRGAP3-208ENST00000490348 TSHZ3Q63HK5 1081 aa17.58■□□□□ 0.41
SRGAP3-208ENST00000490348 ZGPATQ8N5A5 531 aaKnown RBP17.58■□□□□ 0.41
SRGAP3-208ENST00000490348 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.41
SRGAP3-208ENST00000490348 ADM5C9JUS6 153 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 RBM5P52756 815 aaKnown RBP eCLIP17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 MECOMQ03112 1051 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 TEKT1Q969V4 418 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 ZDHHC15Q96MV8 337 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 ATP5JP18859 108 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 HHIPL2Q6UWX4 724 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 KRT26Q7Z3Y9 468 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 USP48Q86UV5 1035 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 DAGLAQ9Y4D2 1042 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 MAST3O60307 1309 aa17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 MYO5AQ9Y4I1 1855 aaKnown RBP17.57■□□□□ 0.4
SRGAP3-208ENST00000490348 CLRN2A0PK11 232 aa17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 CDC37L1Q7L3B6 337 aa17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 DCPSQ96C86 337 aaKnown RBP17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 NSUN4Q96CB9 384 aaKnown RBP17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 EDC3Q96F86 508 aaKnown RBP17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 BOLA2Q9H3K6 86 aa17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 PITPNM2Q9BZ72 1349 aa17.56■□□□□ 0.4
SRGAP3-208ENST00000490348 NUCB1Q02818 461 aa17.55■□□□□ 0.4
SRGAP3-208ENST00000490348 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
SRGAP3-208ENST00000490348 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
SRGAP3-208ENST00000490348 DZIP1Q86YF9 867 aaKnown RBP17.55■□□□□ 0.4
SRGAP3-208ENST00000490348 TDRD3Q9H7E2 651 aaKnown RBP17.55■□□□□ 0.4
SRGAP3-208ENST00000490348 ECHDC1Q9NTX5 307 aa17.55■□□□□ 0.4
SRGAP3-208ENST00000490348 GAKO14976 1311 aa17.55■□□□□ 0.4
SRGAP3-208ENST00000490348 ECM29Q5VYK3 1845 aa17.54■□□□□ 0.4
SRGAP3-208ENST00000490348 DNAJC2Q99543 621 aaKnown RBP17.54■□□□□ 0.4
SRGAP3-208ENST00000490348 HAUS7Q99871 368 aa17.54■□□□□ 0.4
SRGAP3-208ENST00000490348 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
SRGAP3-208ENST00000490348 RAI14Q9P0K7 980 aa17.54■□□□□ 0.4
SRGAP3-208ENST00000490348 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
SRGAP3-208ENST00000490348 ZNF70Q9UC06 446 aaPredicted RBP17.54■□□□□ 0.4
SRGAP3-208ENST00000490348 SULF1Q8IWU6 871 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 PI4K2BQ8TCG2 481 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 FAM163AQ96GL9 167 aaPredicted RBP17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 DOCK2Q92608 1830 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 GOLIM4O00461 696 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 HSPA6P17066 643 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 CACNB3P54284 484 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 CST9Q5W186 159 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 ADGRA1Q86SQ6 560 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
SRGAP3-208ENST00000490348 MROH7-TTC4A0A0A0MT08 1334 aa17.52■□□□□ 0.4
SRGAP3-208ENST00000490348 MYO1BO43795 1136 aa17.52■□□□□ 0.39
SRGAP3-208ENST00000490348 MX1P20591 662 aa17.52■□□□□ 0.39
SRGAP3-208ENST00000490348 APLP1P51693 650 aa17.52■□□□□ 0.39
SRGAP3-208ENST00000490348 HTRA3P83110 453 aa17.52■□□□□ 0.39
SRGAP3-208ENST00000490348 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.39
SRGAP3-208ENST00000490348 VEZTQ9HBM0 779 aa17.52■□□□□ 0.39
SRGAP3-208ENST00000490348 PAG1Q9NWQ8 432 aa17.52■□□□□ 0.39
SRGAP3-208ENST00000490348 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
SRGAP3-208ENST00000490348 TTC41PQ6P2S7 1318 aa17.51■□□□□ 0.39
SRGAP3-208ENST00000490348 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
SRGAP3-208ENST00000490348 CDC42EP5Q6NZY7 148 aa17.51■□□□□ 0.39
SRGAP3-208ENST00000490348 APOBEC3FQ8IUX4 373 aaKnown RBP17.51■□□□□ 0.39
SRGAP3-208ENST00000490348 DEFB129Q9H1M3 183 aa17.51■□□□□ 0.39
SRGAP3-208ENST00000490348 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
SRGAP3-208ENST00000490348 CDCA5Q96FF9 252 aa17.5■□□□□ 0.39
SRGAP3-208ENST00000490348 GPATCH3Q96I76 525 aa17.5■□□□□ 0.39
SRGAP3-208ENST00000490348 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
SRGAP3-208ENST00000490348 CNTNAP1P78357 1384 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms