RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 RNF181Q9P0P0 153 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 RELBQ01201 579 aa11.6□□□□□ -0.55
TNRC6B-208ENST00000489500 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
TNRC6B-208ENST00000489500 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
TNRC6B-208ENST00000489500 CNBD1Q8NA66 436 aa11.6□□□□□ -0.55
TNRC6B-208ENST00000489500 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
TNRC6B-208ENST00000489500 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 TOMM70O94826 608 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 SOGA3Q5TF21 947 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 CNKSR1Q969H4 720 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
TNRC6B-208ENST00000489500 ERVH48-1M5A8F1 160 aa11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 KCNQ3O43525 872 aa11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 HSPA6P17066 643 aa11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 LMNB1P20700 586 aa11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 GTF2E1P29083 439 aaPredicted RBP11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 CTSOP43234 321 aaPredicted RBP11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 TPTE2Q6XPS3 522 aa11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
TNRC6B-208ENST00000489500 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 TNRC6CQ9HCJ0 1690 aaKnown RBP11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 ESPNB1AK53 854 aa11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 ADD1P35611 737 aaKnown RBP11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 PTSQ03393 145 aa11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 PRR5LQ6MZQ0 368 aa11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 INSM2Q96T92 566 aaPredicted RBP11.57□□□□□ -0.56
TNRC6B-208ENST00000489500 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 LILRA1O75019 489 aa11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 STYK1Q6J9G0 422 aa11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 ANKRD31Q8N7Z5 1873 aa11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 ZNF395Q9H8N7 513 aaPredicted RBP11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
TNRC6B-208ENST00000489500 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
TNRC6B-208ENST00000489500 PLEKHF1Q96S99 279 aa11.55□□□□□ -0.56
TNRC6B-208ENST00000489500 BABAM1Q9NWV8 329 aa11.55□□□□□ -0.56
TNRC6B-208ENST00000489500 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
TNRC6B-208ENST00000489500 NUP98P52948 1817 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 ERVV-1B6SEH8 477 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 ALDH1B1P30837 517 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 RIPK4P57078 832 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 FSTL1Q12841 308 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 GPR161Q8N6U8 529 aaKnown RBP11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 KDF1Q8NAX2 398 aaPredicted RBP11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
TNRC6B-208ENST00000489500 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 C21orf2O43822 256 aa11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 NPR1P16066 1061 aa11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 NGEFQ8N5V2 710 aa11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 TMX4Q9H1E5 349 aaPredicted RBP11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 RRAGCQ9HB90 399 aa11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 NMRK2Q9NPI5 230 aa11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 RRP7AQ9Y3A4 280 aaKnown RBP11.53□□□□□ -0.56
TNRC6B-208ENST00000489500 TIAM2Q8IVF5 1701 aa11.52□□□□□ -0.56
TNRC6B-208ENST00000489500 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 GLTPD2A6NH11 291 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 ZBBXA8MT70 800 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 ADH1AP07327 375 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 SRGNP10124 158 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 VEGFAP15692 232 aaPredicted RBP11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 RASSF7Q02833 373 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 TAOK3Q9H2K8 898 aa11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 POLMQ9NP87 494 aaPredicted RBP11.52□□□□□ -0.57
TNRC6B-208ENST00000489500 MYL6BP14649 208 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 NBPF10Q6P3W6 841 aaKnown RBP11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 SMC1BQ8NDV3 1235 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 MAP3K15Q6ZN16 1313 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 LTBP3Q9NS15 1303 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 COL11A2P13942 1736 aaPredicted RBP11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 SLX4Q8IY92 1834 aa11.51□□□□□ -0.57
TNRC6B-208ENST00000489500 SLC35F4A4IF30 521 aa11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 FAM181BA6NEQ2 426 aa11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
TNRC6B-208ENST00000489500 CYLDQ9NQC7 956 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms