RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 KDM2BQ8NHM5 1336 aa9□□□□□ -0.97
SCMH1-216ENST00000489421 USP42Q9H9J4 1324 aaKnown RBP9□□□□□ -0.97
SCMH1-216ENST00000489421 ADCY9O60503 1353 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 F6X3S4 739 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 ANXA1P04083 346 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 MMP10P09238 476 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 CYP19A1P11511 503 aaPredicted RBP8.99□□□□□ -0.97
SCMH1-216ENST00000489421 DDR1Q08345 913 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 NBPF10Q6P3W6 841 aaKnown RBP8.99□□□□□ -0.97
SCMH1-216ENST00000489421 NBPF15Q8N660 670 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 ZNF784Q8NCA9 323 aaPredicted RBP8.99□□□□□ -0.97
SCMH1-216ENST00000489421 ARMC2Q8NEN0 867 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 C1QTNF2Q9BXJ5 285 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 SENP2Q9HC62 589 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 RTCBQ9Y3I0 505 aaKnown RBP8.99□□□□□ -0.97
SCMH1-216ENST00000489421 CD2APQ9Y5K6 639 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 COL15A1P39059 1388 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 CARMIL3Q8ND23 1372 aa8.99□□□□□ -0.97
SCMH1-216ENST00000489421 PI4KAP2A4QPH2 592 aa8.98□□□□□ -0.97
SCMH1-216ENST00000489421 STARD3NLO95772 234 aa8.98□□□□□ -0.97
SCMH1-216ENST00000489421 NR3C2P08235 984 aa8.98□□□□□ -0.97
SCMH1-216ENST00000489421 ARID5BQ14865 1188 aa8.98□□□□□ -0.97
SCMH1-216ENST00000489421 KSR2Q6VAB6 950 aa8.98□□□□□ -0.97
SCMH1-216ENST00000489421 PI4KAP1Q8N8J0 262 aa8.98□□□□□ -0.97
SCMH1-216ENST00000489421 KLF16Q9BXK1 252 aaPredicted RBP8.98□□□□□ -0.97
SCMH1-216ENST00000489421 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
SCMH1-216ENST00000489421 IBTKQ9P2D0 1353 aaPredicted RBP8.98□□□□□ -0.97
SCMH1-216ENST00000489421 DDX60Q8IY21 1712 aaKnown RBP8.97□□□□□ -0.97
SCMH1-216ENST00000489421 DDX58O95786 925 aaKnown RBP8.97□□□□□ -0.97
SCMH1-216ENST00000489421 IGHDP01880 384 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 A1BGP04217 495 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 TIMP2P16035 220 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 GRM5P41594 1212 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 HDAC1Q13547 482 aaPredicted RBP8.97□□□□□ -0.97
SCMH1-216ENST00000489421 GPR162Q16538 588 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 TRAPPC3LQ5T215 181 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 BEND3Q5T5X7 828 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 CENPQQ7L2Z9 268 aaPredicted RBP8.97□□□□□ -0.97
SCMH1-216ENST00000489421 COPS6Q7L5N1 327 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 XAGE3Q8WTP9 111 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 DNAAF4Q8WXU2 420 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 CCDC87Q9NVE4 849 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 ATP10DQ9P241 1426 aa8.97□□□□□ -0.97
SCMH1-216ENST00000489421 MYL6BP14649 208 aa8.96□□□□□ -0.98
SCMH1-216ENST00000489421 KCNA3P22001 575 aa8.96□□□□□ -0.98
SCMH1-216ENST00000489421 NR6A1Q15406 480 aa8.96□□□□□ -0.98
SCMH1-216ENST00000489421 SLC4A10Q6U841 1118 aa8.96□□□□□ -0.98
SCMH1-216ENST00000489421 RWDD1Q9H446 243 aaPredicted RBP8.96□□□□□ -0.98
SCMH1-216ENST00000489421 MAGEB6P1A0A0J9YX57 407 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 POLRMTO00411 1230 aaKnown RBP8.95□□□□□ -0.98
SCMH1-216ENST00000489421 AP1G2O75843 785 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 ALDH1L1O75891 902 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 RFC4P35249 363 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 WDR4P57081 412 aaKnown RBP8.95□□□□□ -0.98
SCMH1-216ENST00000489421 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 MEIS3Q99687 375 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 SRCIN1Q9C0H9 1055 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 USP44Q9H0E7 712 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 MAP3K2Q9Y2U5 619 aa8.95□□□□□ -0.98
SCMH1-216ENST00000489421 SPEF2Q9C093 1822 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 A0A0G2JLW4 131 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 GNAI3P08754 354 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 TM4SF1P30408 202 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 PIP4K2AP48426 406 aaPredicted RBP8.94□□□□□ -0.98
SCMH1-216ENST00000489421 AIMP1Q12904 312 aaKnown RBP8.94□□□□□ -0.98
SCMH1-216ENST00000489421 USPL1Q5W0Q7 1092 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 SIRT2Q8IXJ6 389 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 RPAP2Q8IXW5 612 aaPredicted RBP8.94□□□□□ -0.98
SCMH1-216ENST00000489421 TRMT44Q8IYL2 757 aaKnown RBP8.94□□□□□ -0.98
SCMH1-216ENST00000489421 LINS1Q8NG48 757 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 PLBD2Q8NHP8 589 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 GPKOWQ92917 476 aaPredicted RBP eCLIP8.94□□□□□ -0.98
SCMH1-216ENST00000489421 METTL22Q9BUU2 404 aaPredicted RBP8.94□□□□□ -0.98
SCMH1-216ENST00000489421 ZFAND3Q9H8U3 227 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 HMX1Q9NP08 348 aaPredicted RBP8.94□□□□□ -0.98
SCMH1-216ENST00000489421 FKBPLQ9UIM3 349 aa8.94□□□□□ -0.98
SCMH1-216ENST00000489421 MYH3P11055 1940 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 GNAI2P04899 355 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 DPEP1P16444 411 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 RFC5P40937 340 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 EIF5P55010 431 aaKnown RBP8.93□□□□□ -0.98
SCMH1-216ENST00000489421 NFX1Q12986 1120 aaKnown RBP8.93□□□□□ -0.98
SCMH1-216ENST00000489421 NR5A1Q13285 461 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 NFIXQ14938 502 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 ERFEQ4G0M1 354 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 TTLL7Q6ZT98 887 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 NLGN1Q8N2Q7 840 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 ANKRD44Q8N8A2 993 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 EPS8L1Q8TE68 723 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 NARFQ9UHQ1 456 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 UTYO14607 1347 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 WDR90Q96KV7 1748 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
SCMH1-216ENST00000489421 USP17L8P0C7I0 530 aa8.92□□□□□ -0.98
SCMH1-216ENST00000489421 HMGB2P26583 209 aaKnown RBP8.92□□□□□ -0.98
SCMH1-216ENST00000489421 IL6STP40189 918 aaPredicted RBP8.92□□□□□ -0.98
SCMH1-216ENST00000489421 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
SCMH1-216ENST00000489421 LCE2CQ5TA81 110 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms