RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 PHKA1P46020 1223 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
CSMD2-209ENST00000489419 ACSBG1Q96GR2 724 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 PIH1D3Q9NQM4 214 aaKnown RBP10.37□□□□□ -0.75
CSMD2-209ENST00000489419 DDX19AQ9NUU7 478 aaKnown RBP10.37□□□□□ -0.75
CSMD2-209ENST00000489419 TCRBV5S4A2TA0A5A2 114 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 HCLS1P14317 486 aaPredicted RBP10.36□□□□□ -0.75
CSMD2-209ENST00000489419 PDE6AP16499 860 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 MAP3K12Q12852 859 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 TRDNQ13061 729 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 MAPK8IP2Q13387 824 aaPredicted RBP10.36□□□□□ -0.75
CSMD2-209ENST00000489419 PI16Q6UXB8 463 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 SPATA5Q8NB90 893 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 CDC5LQ99459 802 aaKnown RBP10.36□□□□□ -0.75
CSMD2-209ENST00000489419 NIP7Q9Y221 180 aaKnown RBP eCLIP10.36□□□□□ -0.75
CSMD2-209ENST00000489419 PRC1O43663 620 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 ZNF396Q96N95 335 aaPredicted RBP10.36□□□□□ -0.75
CSMD2-209ENST00000489419 CCDC39Q9UFE4 941 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 RCOR1Q9UKL0 485 aa10.36□□□□□ -0.75
CSMD2-209ENST00000489419 A0A0G2JLW4 131 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 IDH1O75874 414 aaKnown RBP10.35□□□□□ -0.75
CSMD2-209ENST00000489419 CCDC192P0DO97 292 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 DDX11Q96FC9 970 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 STRBPQ96SI9 672 aaKnown RBP10.35□□□□□ -0.75
CSMD2-209ENST00000489419 NOL7Q9UMY1 257 aaKnown RBP10.35□□□□□ -0.75
CSMD2-209ENST00000489419 LAMB2P55268 1798 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 ZNF532Q9HCE3 1301 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 SF3B3Q15393 1217 aaKnown RBP10.35□□□□□ -0.75
CSMD2-209ENST00000489419 VPS72Q15906 364 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
CSMD2-209ENST00000489419 RC3H1Q5TC82 1133 aaKnown RBP10.35□□□□□ -0.75
CSMD2-209ENST00000489419 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 NUP62CLQ9H1M0 184 aa10.35□□□□□ -0.75
CSMD2-209ENST00000489419 TFIP11Q9UBB9 837 aaKnown RBP10.35□□□□□ -0.75
CSMD2-209ENST00000489419 NUTM2BA6NNL0 878 aaPredicted RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 NUTM2EB1AL46 878 aaPredicted RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 DTNBO60941 627 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 GNAT2P19087 354 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 ADD1P35611 737 aaKnown RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 CCT2P78371 535 aaKnown RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 MAP3K11Q16584 847 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 FAM173BQ6P4H8 233 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 NUTM2AQ8IVF1 878 aaPredicted RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 AIDAQ96BJ3 306 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 TMEM87BQ96K49 555 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 ARID3AQ99856 593 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 CNTNAP4Q9C0A0 1308 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 COL5A3P25940 1745 aaPredicted RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 DDX60Q8IY21 1712 aaKnown RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 NPM3O75607 178 aaKnown RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 KIF20AO95235 890 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 ANTXR2P58335 489 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 HAND2P61296 217 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
CSMD2-209ENST00000489419 MTA3Q9BTC8 594 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 SEC31BQ9NQW1 1179 aa10.34□□□□□ -0.75
CSMD2-209ENST00000489419 KLF18A0A0U1RQI7 1052 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 CAVIN2O95810 425 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 MSNP26038 577 aaKnown RBP10.33□□□□□ -0.76
CSMD2-209ENST00000489419 RASGRF1Q13972 1273 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 GIMAP6Q6P9H5 292 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 ANGEL1Q9UNK9 670 aaKnown RBP10.33□□□□□ -0.76
CSMD2-209ENST00000489419 PNPLA7Q6ZV29 1317 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 CARMIL3Q8ND23 1372 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 BCORQ6W2J9 1755 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 A0A0G2JS52 829 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 FDPSP14324 419 aaKnown RBP10.33□□□□□ -0.76
CSMD2-209ENST00000489419 LIG1P18858 919 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 UBE4AQ14139 1066 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 CHST3Q7LGC8 479 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 PGBD1Q96JS3 809 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 CLSTN2Q9H4D0 955 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 CNNM2Q9H8M5 875 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 NCOA5Q9HCD5 579 aaKnown RBP10.33□□□□□ -0.76
CSMD2-209ENST00000489419 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
CSMD2-209ENST00000489419 DOCK2Q92608 1830 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 CTAGE5O15320 804 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 ZNF500O60304 480 aaPredicted RBP10.32□□□□□ -0.76
CSMD2-209ENST00000489419 KDM4AO75164 1064 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 CDKL5O76039 1030 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 APPP05067 770 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 CHRNDQ07001 517 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 NBPF3Q9H094 633 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 TNMDQ9H2S6 317 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 GNL3LQ9NVN8 582 aaKnown RBP10.32□□□□□ -0.76
CSMD2-209ENST00000489419 BSDC1Q9NW68 430 aaPredicted RBP10.32□□□□□ -0.76
CSMD2-209ENST00000489419 DACT1Q9NYF0 836 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 ZNF804BA4D1E1 1349 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 GOLGA8BA8MQT2 603 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 CPLX1O14810 134 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 ZBTB22O15209 634 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 KCNQ2O43526 872 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 LIFRP42702 1097 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 CPLX2Q6PUV4 134 aaKnown RBP10.32□□□□□ -0.76
CSMD2-209ENST00000489419 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
CSMD2-209ENST00000489419 SGMS1Q86VZ5 419 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms