RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 PDRG1Q9NUG6 133 aa21.52■■□□□ 1.04
CD40-206ENST00000489304 CCDC88AQ3V6T2 1871 aa21.52■■□□□ 1.04
CD40-206ENST00000489304 CPA1P15085 419 aa21.52■■□□□ 1.03
CD40-206ENST00000489304 AK2P54819 239 aa21.52■■□□□ 1.03
CD40-206ENST00000489304 BLOC1S2Q6QNY1 142 aa21.52■■□□□ 1.03
CD40-206ENST00000489304 RAI14Q9P0K7 980 aa21.52■■□□□ 1.03
CD40-206ENST00000489304 ZNF384Q8TF68 577 aa21.51■■□□□ 1.03
CD40-206ENST00000489304 TMX4Q9H1E5 349 aaPredicted RBP21.51■■□□□ 1.03
CD40-206ENST00000489304 MAST2Q6P0Q8 1798 aa21.51■■□□□ 1.03
CD40-206ENST00000489304 C21orf2O43822 256 aa21.5■■□□□ 1.03
CD40-206ENST00000489304 IL1R1P14778 569 aa21.5■■□□□ 1.03
CD40-206ENST00000489304 RPS6KB1P23443 525 aa21.5■■□□□ 1.03
CD40-206ENST00000489304 GRIK5Q16478 980 aa21.5■■□□□ 1.03
CD40-206ENST00000489304 STRBPQ96SI9 672 aaKnown RBP21.5■■□□□ 1.03
CD40-206ENST00000489304 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
CD40-206ENST00000489304 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
CD40-206ENST00000489304 FGAP02671 866 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 PTGER2P43116 358 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 DOK7Q18PE1 504 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 ADGRA1Q86SQ6 560 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 TTLL6Q8N841 843 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 AIDAQ96BJ3 306 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 LIMCH1Q9UPQ0 1083 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 CYP7A1P22680 504 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 PRDX5P30044 214 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 NEK1Q96PY6 1258 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
CD40-206ENST00000489304 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 KIF13BQ9NQT8 1826 aa21.49■■□□□ 1.03
CD40-206ENST00000489304 PPP1R1BQ9UD71 204 aaPredicted RBP21.49■■□□□ 1.03
CD40-206ENST00000489304 SNED1Q8TER0 1413 aa21.48■■□□□ 1.03
CD40-206ENST00000489304 ALX1Q15699 326 aa21.48■■□□□ 1.03
CD40-206ENST00000489304 STOX1Q6ZVD7 989 aa21.48■■□□□ 1.03
CD40-206ENST00000489304 INTS4Q96HW7 963 aaKnown RBP21.48■■□□□ 1.03
CD40-206ENST00000489304 ZC3H12CQ9C0D7 883 aaKnown RBP21.48■■□□□ 1.03
CD40-206ENST00000489304 DLEC1Q9Y238 1755 aa21.48■■□□□ 1.03
CD40-206ENST00000489304 IGSF3O75054 1194 aa21.47■■□□□ 1.03
CD40-206ENST00000489304 MBD4O95243 580 aa21.47■■□□□ 1.03
CD40-206ENST00000489304 COL9A3Q14050 684 aaPredicted RBP21.47■■□□□ 1.03
CD40-206ENST00000489304 TTLL5Q6EMB2 1281 aa21.47■■□□□ 1.03
CD40-206ENST00000489304 TMED8Q6PL24 325 aaPredicted RBP21.47■■□□□ 1.03
CD40-206ENST00000489304 NOL8Q76FK4 1167 aaKnown RBP21.47■■□□□ 1.03
CD40-206ENST00000489304 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
CD40-206ENST00000489304 MIGA1Q8NAN2 632 aa21.47■■□□□ 1.03
CD40-206ENST00000489304 ZMYM6O95789 1325 aa21.47■■□□□ 1.03
CD40-206ENST00000489304 SALL1Q9NSC2 1324 aa21.47■■□□□ 1.03
CD40-206ENST00000489304 HMGB1P09429 215 aaKnown RBP21.46■■□□□ 1.03
CD40-206ENST00000489304 TGFB2P61812 414 aa21.46■■□□□ 1.03
CD40-206ENST00000489304 IMMTQ16891 758 aaKnown RBP21.46■■□□□ 1.03
CD40-206ENST00000489304 ARMT1Q9H993 441 aa21.46■■□□□ 1.03
CD40-206ENST00000489304 E7EWF7 191 aa21.46■■□□□ 1.03
CD40-206ENST00000489304 MECOMQ03112 1051 aa21.46■■□□□ 1.03
CD40-206ENST00000489304 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
CD40-206ENST00000489304 WDR66Q8TBY9 1149 aa21.46■■□□□ 1.03
CD40-206ENST00000489304 NSUN4Q96CB9 384 aaKnown RBP21.46■■□□□ 1.03
CD40-206ENST00000489304 ZSCAN31Q96LW9 406 aaPredicted RBP21.46■■□□□ 1.03
CD40-206ENST00000489304 COA1Q9GZY4 146 aa21.46■■□□□ 1.03
CD40-206ENST00000489304 PATL2C9JE40 543 aaKnown RBP21.45■■□□□ 1.02
CD40-206ENST00000489304 GNAT2P19087 354 aa21.45■■□□□ 1.02
CD40-206ENST00000489304 LCORLQ8N3X6 602 aa21.45■■□□□ 1.02
CD40-206ENST00000489304 EYA3Q99504 573 aa21.45■■□□□ 1.02
CD40-206ENST00000489304 RTFDC1Q9BY42 306 aaPredicted RBP21.45■■□□□ 1.02
CD40-206ENST00000489304 CHD4Q14839 1912 aa21.45■■□□□ 1.02
CD40-206ENST00000489304 SPTY2D1Q68D10 685 aaPredicted RBP21.44■■□□□ 1.02
CD40-206ENST00000489304 NAA16Q6N069 864 aaPredicted RBP21.44■■□□□ 1.02
CD40-206ENST00000489304 ZGPATQ8N5A5 531 aaKnown RBP21.44■■□□□ 1.02
CD40-206ENST00000489304 PRKAB2O43741 272 aa21.43■■□□□ 1.02
CD40-206ENST00000489304 DYNLL1P63167 89 aaKnown RBP21.43■■□□□ 1.02
CD40-206ENST00000489304 GTF2IP78347 998 aa21.43■■□□□ 1.02
CD40-206ENST00000489304 NFKBIBQ15653 356 aa21.43■■□□□ 1.02
CD40-206ENST00000489304 DBNDD1Q9H9R9 158 aa21.43■■□□□ 1.02
CD40-206ENST00000489304 SH2B1Q9NRF2 756 aaPredicted RBP21.43■■□□□ 1.02
CD40-206ENST00000489304 TOB2Q14106 344 aaPredicted RBP21.43■■□□□ 1.02
CD40-206ENST00000489304 CC2D2BQ6DHV5 1058 aa21.43■■□□□ 1.02
CD40-206ENST00000489304 DHX32Q7L7V1 743 aaKnown RBP21.43■■□□□ 1.02
CD40-206ENST00000489304 GSG1L2A8MUP6 293 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 ZNF213O14771 459 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 APPP05067 770 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 AOC3Q16853 763 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 FBXW7Q969H0 707 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 KCNQ5Q9NR82 932 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 PIM2Q9P1W9 311 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 FAM205AQ6ZU69 1335 aa21.42■■□□□ 1.02
CD40-206ENST00000489304 MAGEB6P1A0A0J9YX57 407 aa21.41■■□□□ 1.02
CD40-206ENST00000489304 LDHBP07195 334 aaKnown RBP21.41■■□□□ 1.02
CD40-206ENST00000489304 EXOSC10Q01780 885 aaKnown RBP21.41■■□□□ 1.02
CD40-206ENST00000489304 RAB3GAP1Q15042 981 aa21.41■■□□□ 1.02
CD40-206ENST00000489304 CCDC93Q567U6 631 aa21.41■■□□□ 1.02
CD40-206ENST00000489304 IFNL3Q8IZI9 196 aa21.41■■□□□ 1.02
CD40-206ENST00000489304 RIOK1Q9BRS2 568 aaKnown RBP21.41■■□□□ 1.02
CD40-206ENST00000489304 LARP6Q9BRS8 491 aaKnown RBP21.41■■□□□ 1.02
CD40-206ENST00000489304 MXD3Q9BW11 206 aa21.41■■□□□ 1.02
CD40-206ENST00000489304 EPB41L4AQ9HCS5 686 aaPredicted RBP21.41■■□□□ 1.02
CD40-206ENST00000489304 HAND2P61296 217 aa21.41■■□□□ 1.02
CD40-206ENST00000489304 TCEANC2Q96MN5 208 aa21.41■■□□□ 1.02
CD40-206ENST00000489304 TIAM2Q8IVF5 1701 aa21.4■■□□□ 1.02
CD40-206ENST00000489304 G3V3G9 751 aa21.4■■□□□ 1.02
CD40-206ENST00000489304 LARGE1O95461 756 aa21.4■■□□□ 1.02
CD40-206ENST00000489304 NBR1Q14596 966 aa21.4■■□□□ 1.02
CD40-206ENST00000489304 DCAF8Q5TAQ9 597 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms