RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 TCP10L2B9ZVM9 353 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 MYCP01106 439 aaPredicted RBP14.51□□□□□ -0.09
USP11-210ENST00000489030 CACNB3P54284 484 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 SP3Q02447 781 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 ANKRD13AQ8IZ07 590 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 TDRD7Q8NHU6 1098 aaKnown RBP14.51□□□□□ -0.09
USP11-210ENST00000489030 CDCA7LQ96GN5 454 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 CHMP4AQ9BY43 222 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 ARHGAP39Q9C0H5 1083 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 TTF2Q9UNY4 1162 aaKnown RBP14.51□□□□□ -0.09
USP11-210ENST00000489030 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 CEP290O15078 2479 aa14.51□□□□□ -0.09
USP11-210ENST00000489030 ZSWIM8A7E2V4 1837 aa14.5□□□□□ -0.09
USP11-210ENST00000489030 MYO1BO43795 1136 aa14.5□□□□□ -0.09
USP11-210ENST00000489030 FXR1P51114 621 aaKnown RBP eCLIP14.5□□□□□ -0.09
USP11-210ENST00000489030 EXOSC9Q06265 439 aaKnown RBP14.5□□□□□ -0.09
USP11-210ENST00000489030 VGLL4Q14135 290 aa14.5□□□□□ -0.09
USP11-210ENST00000489030 MFSD14BQ5SR56 506 aa14.5□□□□□ -0.09
USP11-210ENST00000489030 INTS3Q68E01 1043 aaKnown RBP14.5□□□□□ -0.09
USP11-210ENST00000489030 DZIP1LQ8IYY4 767 aaKnown RBP14.5□□□□□ -0.09
USP11-210ENST00000489030 TRMT2AQ8IZ69 625 aaKnown RBP14.5□□□□□ -0.09
USP11-210ENST00000489030 KAZALD1Q96I82 304 aa14.5□□□□□ -0.09
USP11-210ENST00000489030 ZNF333Q96JL9 665 aa14.5□□□□□ -0.09
USP11-210ENST00000489030 FAM84BQ96KN1 310 aaPredicted RBP14.5□□□□□ -0.09
USP11-210ENST00000489030 IQSEC3Q9UPP2 1182 aaPredicted RBP14.5□□□□□ -0.09
USP11-210ENST00000489030 TRIOBPQ9H2D6 2365 aa14.49□□□□□ -0.09
USP11-210ENST00000489030 ECM2O94769 699 aaPredicted RBP14.49□□□□□ -0.09
USP11-210ENST00000489030 LDHAL6AQ6ZMR3 332 aa14.49□□□□□ -0.09
USP11-210ENST00000489030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.49□□□□□ -0.09
USP11-210ENST00000489030 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
USP11-210ENST00000489030 CACNA1FO60840 1977 aa14.49□□□□□ -0.09
USP11-210ENST00000489030 RBBP6Q7Z6E9 1792 aaKnown RBP14.48□□□□□ -0.09
USP11-210ENST00000489030 CCL15-CCL14A0A0B4J2E2 113 aa14.48□□□□□ -0.09
USP11-210ENST00000489030 UNCXA6NJT0 531 aa14.48□□□□□ -0.09
USP11-210ENST00000489030 CRKP46108 304 aa14.48□□□□□ -0.09
USP11-210ENST00000489030 TAF1CQ15572 869 aaPredicted RBP14.48□□□□□ -0.09
USP11-210ENST00000489030 CCL15Q16663 113 aa14.48□□□□□ -0.09
USP11-210ENST00000489030 GCC1Q96CN9 775 aa14.48□□□□□ -0.09
USP11-210ENST00000489030 OTUD5Q96G74 571 aa14.48□□□□□ -0.09
USP11-210ENST00000489030 CNNM1Q9NRU3 951 aa14.48□□□□□ -0.09
USP11-210ENST00000489030 GRM8O00222 908 aa14.47□□□□□ -0.09
USP11-210ENST00000489030 HIBADHP31937 336 aaKnown RBP14.47□□□□□ -0.09
USP11-210ENST00000489030 CCDC57Q2TAC2 916 aa14.47□□□□□ -0.09
USP11-210ENST00000489030 OTUD7BQ6GQQ9 843 aa14.47□□□□□ -0.09
USP11-210ENST00000489030 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
USP11-210ENST00000489030 SERPINA10Q9UK55 444 aa14.47□□□□□ -0.09
USP11-210ENST00000489030 COLQQ9Y215 455 aaPredicted RBP14.47□□□□□ -0.09
USP11-210ENST00000489030 SNCAIPQ9Y6H5 919 aa14.47□□□□□ -0.09
USP11-210ENST00000489030 CTGFP29279 349 aa14.46□□□□□ -0.09
USP11-210ENST00000489030 MAP3K9P80192 1104 aa14.46□□□□□ -0.09
USP11-210ENST00000489030 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
USP11-210ENST00000489030 TAF7LQ5H9L4 462 aa14.46□□□□□ -0.09
USP11-210ENST00000489030 BTBD19C9JJ37 291 aa14.45□□□□□ -0.1
USP11-210ENST00000489030 UBE4AQ14139 1066 aa14.45□□□□□ -0.1
USP11-210ENST00000489030 LRRC24Q50LG9 513 aa14.45□□□□□ -0.1
USP11-210ENST00000489030 FBXO33Q7Z6M2 555 aa14.45□□□□□ -0.1
USP11-210ENST00000489030 ZKSCAN4Q969J2 545 aaPredicted RBP14.45□□□□□ -0.1
USP11-210ENST00000489030 RIPOR2Q9Y4F9 1068 aa14.45□□□□□ -0.1
USP11-210ENST00000489030 ARAP2Q8WZ64 1704 aa14.44□□□□□ -0.1
USP11-210ENST00000489030 SPDYE5A6NIY4 337 aa14.44□□□□□ -0.1
USP11-210ENST00000489030 H0YGN5 161 aa14.44□□□□□ -0.1
USP11-210ENST00000489030 NBPF7P0C2Y1 421 aaPredicted RBP14.44□□□□□ -0.1
USP11-210ENST00000489030 GTF2A2P52657 109 aa14.44□□□□□ -0.1
USP11-210ENST00000489030 TNFAIP1Q13829 316 aa14.44□□□□□ -0.1
USP11-210ENST00000489030 SLC9C1Q4G0N8 1177 aa14.44□□□□□ -0.1
USP11-210ENST00000489030 ZFYVE28Q9HCC9 887 aa14.44□□□□□ -0.1
USP11-210ENST00000489030 IRF6O14896 467 aa14.43□□□□□ -0.1
USP11-210ENST00000489030 CT47B1P0C2W7 299 aaPredicted RBP14.43□□□□□ -0.1
USP11-210ENST00000489030 SLC4A8Q2Y0W8 1093 aa14.43□□□□□ -0.1
USP11-210ENST00000489030 SLC4A10Q6U841 1118 aa14.43□□□□□ -0.1
USP11-210ENST00000489030 ANKRD44Q8N8A2 993 aa14.43□□□□□ -0.1
USP11-210ENST00000489030 KLHDC4Q8TBB5 520 aa14.43□□□□□ -0.1
USP11-210ENST00000489030 SHISA4Q96DD7 197 aa14.43□□□□□ -0.1
USP11-210ENST00000489030 TMEM106CQ9BVX2 250 aa14.43□□□□□ -0.1
USP11-210ENST00000489030 BCAMP50895 628 aa14.42□□□□□ -0.1
USP11-210ENST00000489030 LACTBP83111 547 aaPredicted RBP14.42□□□□□ -0.1
USP11-210ENST00000489030 MTFR1Q15390 333 aa14.42□□□□□ -0.1
USP11-210ENST00000489030 APOBEC3HQ6NTF7 200 aaKnown RBP14.42□□□□□ -0.1
USP11-210ENST00000489030 VGLL2Q8N8G2 317 aa14.42□□□□□ -0.1
USP11-210ENST00000489030 WRNIP1Q96S55 665 aa14.42□□□□□ -0.1
USP11-210ENST00000489030 C9orf78Q9NZ63 289 aaPredicted RBP14.42□□□□□ -0.1
USP11-210ENST00000489030 CSADQ9Y600 493 aa14.42□□□□□ -0.1
USP11-210ENST00000489030 TLR2O60603 784 aa14.41□□□□□ -0.1
USP11-210ENST00000489030 INPP5BP32019 993 aa14.41□□□□□ -0.1
USP11-210ENST00000489030 MIGA2Q7L4E1 593 aa14.41□□□□□ -0.1
USP11-210ENST00000489030 BICC1Q9H694 974 aaKnown RBP14.41□□□□□ -0.1
USP11-210ENST00000489030 CPA4Q9UI42 421 aa14.41□□□□□ -0.1
USP11-210ENST00000489030 ALDH1L1O75891 902 aa14.4□□□□□ -0.1
USP11-210ENST00000489030 CENPBP07199 599 aaPredicted RBP14.4□□□□□ -0.1
USP11-210ENST00000489030 ERO1BQ86YB8 467 aa14.4□□□□□ -0.1
USP11-210ENST00000489030 SRCIN1Q9C0H9 1055 aa14.4□□□□□ -0.1
USP11-210ENST00000489030 ADGRA2Q96PE1 1338 aa14.4□□□□□ -0.1
USP11-210ENST00000489030 CETPP11597 493 aa14.39□□□□□ -0.11
USP11-210ENST00000489030 TNNI2P48788 182 aa14.39□□□□□ -0.11
USP11-210ENST00000489030 MOGSQ13724 837 aa14.39□□□□□ -0.11
USP11-210ENST00000489030 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
USP11-210ENST00000489030 TRIM47Q96LD4 638 aa14.39□□□□□ -0.11
USP11-210ENST00000489030 ZDHHC15Q96MV8 337 aa14.39□□□□□ -0.11
USP11-210ENST00000489030 UTYO14607 1347 aa14.39□□□□□ -0.11
USP11-210ENST00000489030 MROH5Q6ZUA9 1318 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms