RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TMPRSS13Q9BYE2 586 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 RNF208Q9H0X6 261 aa6.77□□□□□ -1.33
RFC4-213ENST00000489028 MEGF11A6BM72 1044 aa6.76□□□□□ -1.33
RFC4-213ENST00000489028 ATP2B2Q01814 1243 aa6.75□□□□□ -1.33
RFC4-213ENST00000489028 POU4F3Q15319 338 aa6.75□□□□□ -1.33
RFC4-213ENST00000489028 PRR23CQ6ZRP0 262 aa6.75□□□□□ -1.33
RFC4-213ENST00000489028 CEP41Q9BYV8 373 aa6.75□□□□□ -1.33
RFC4-213ENST00000489028 AKAP2Q9Y2D5 859 aa6.75□□□□□ -1.33
RFC4-213ENST00000489028 TIAF1O95411 115 aa6.74□□□□□ -1.33
RFC4-213ENST00000489028 COL19A1Q14993 1142 aa6.74□□□□□ -1.33
RFC4-213ENST00000489028 ANKRD34AQ69YU3 496 aa6.74□□□□□ -1.33
RFC4-213ENST00000489028 HOMEZQ8IX15 550 aa6.74□□□□□ -1.33
RFC4-213ENST00000489028 STK35Q8TDR2 534 aa6.74□□□□□ -1.33
RFC4-213ENST00000489028 PRPF40AO75400 957 aaKnown RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 CYP11A1P05108 521 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 XRCC5P13010 732 aaKnown RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 DRD2P14416 443 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 TAGLNQ01995 201 aaKnown RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 CCDC27Q2M243 656 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 EAPPQ56P03 285 aaPredicted RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 PRSS36Q5K4E3 855 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 FBXO33Q7Z6M2 555 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 SMG8Q8ND04 991 aaKnown RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 UTP4Q969X6 686 aaKnown RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 MYRFLQ96LU7 910 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 DUSP9Q99956 384 aaKnown RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 C12orf49Q9H741 205 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
RFC4-213ENST00000489028 GPN3Q9UHW5 284 aaPredicted RBP6.73□□□□□ -1.33
RFC4-213ENST00000489028 FBXO24O75426 580 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 USP17L7P0C7H9 530 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 GSTT1P30711 240 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 UVSSAQ2YD98 709 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 EXOSC6Q5RKV6 272 aaKnown RBP6.72□□□□□ -1.33
RFC4-213ENST00000489028 NUTM2GQ5VZR2 741 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.72□□□□□ -1.33
RFC4-213ENST00000489028 TMEM39AQ9NV64 488 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 PPP4R2Q9NY27 417 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 SPG7Q9UQ90 795 aa6.72□□□□□ -1.33
RFC4-213ENST00000489028 GNA15P30679 374 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 AP3B2Q13367 1082 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 TPTE2Q6XPS3 522 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 FAM20CQ8IXL6 584 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 C12orf50Q8NA57 414 aaPredicted RBP6.71□□□□□ -1.34
RFC4-213ENST00000489028 WDR89Q96FK6 387 aaPredicted RBP6.71□□□□□ -1.34
RFC4-213ENST00000489028 NECAB3Q96P71 396 aaPredicted RBP6.71□□□□□ -1.34
RFC4-213ENST00000489028 CORO1BQ9BR76 489 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 ZC3H12CQ9C0D7 883 aaKnown RBP6.71□□□□□ -1.34
RFC4-213ENST00000489028 SRCIN1Q9C0H9 1055 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 CCDC86Q9H6F5 360 aaKnown RBP6.71□□□□□ -1.34
RFC4-213ENST00000489028 RAXQ9Y2V3 346 aa6.71□□□□□ -1.34
RFC4-213ENST00000489028 ENC1O14682 589 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 GIPC1O14908 333 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 DHX15O43143 795 aaKnown RBP6.7□□□□□ -1.34
RFC4-213ENST00000489028 SART1O43290 800 aaKnown RBP6.7□□□□□ -1.34
RFC4-213ENST00000489028 PAGE1O75459 146 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 ADH5P11766 374 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 BMP3P12645 472 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 SGO2Q562F6 1265 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 C2CD4AQ8NCU7 369 aaPredicted RBP6.7□□□□□ -1.34
RFC4-213ENST00000489028 DDX54Q8TDD1 881 aaKnown RBP6.7□□□□□ -1.34
RFC4-213ENST00000489028 WDR18Q9BV38 432 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 CYP4F12Q9HCS2 524 aa6.7□□□□□ -1.34
RFC4-213ENST00000489028 ZNF862O60290 1169 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 EIF4EBP3O60516 100 aaPredicted RBP6.69□□□□□ -1.34
RFC4-213ENST00000489028 GSTP1P09211 210 aaKnown RBP6.69□□□□□ -1.34
RFC4-213ENST00000489028 LIG1P18858 919 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 FSTP19883 344 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 SOX4Q06945 474 aaPredicted RBP6.69□□□□□ -1.34
RFC4-213ENST00000489028 RASIP1Q5U651 963 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 SULF2Q8IWU5 870 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 TRIM42Q8IWZ5 723 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 FAM161BQ96MY7 647 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 C7orf69Q9H7B7 122 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 ZFYVE1Q9HBF4 777 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 FAM8A1Q9UBU6 413 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 PARP2Q9UGN5 583 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
RFC4-213ENST00000489028 HMX2A2RU54 273 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 GAS2O43903 313 aaKnown RBP6.68□□□□□ -1.34
RFC4-213ENST00000489028 AOC2O75106 756 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 CELA3AP09093 270 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 PPP2R3AQ06190 1150 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 PDE3AQ14432 1141 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 AKAP4Q5JQC9 854 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 CDPF1Q6NVV7 123 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 MPRIPQ6WCQ1 1025 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 ANKRD24Q8TF21 1146 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 PPP1R9AQ9ULJ8 1098 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 ACTL7BQ9Y614 415 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 AK5Q9Y6K8 562 aa6.68□□□□□ -1.34
RFC4-213ENST00000489028 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 BMP6P22004 513 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 NME2P22392 152 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 EIF4BP23588 611 aaKnown RBP6.67□□□□□ -1.34
RFC4-213ENST00000489028 ARNTP27540 789 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 ZNF252P-AS1Q0IIN9 211 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 BEND4Q6ZU67 534 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms