RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 TM6SF1Q9BZW5 370 aa21.7■■□□□ 1.06
COL16A1-215ENST00000488897 SNRKQ9NRH2 765 aa21.7■■□□□ 1.06
COL16A1-215ENST00000488897 LRP5O75197 1615 aa21.7■■□□□ 1.06
COL16A1-215ENST00000488897 IFIT2P09913 472 aaKnown RBP21.7■■□□□ 1.06
COL16A1-215ENST00000488897 CASTP20810 708 aaKnown RBP21.7■■□□□ 1.06
COL16A1-215ENST00000488897 SYT1P21579 422 aa21.7■■□□□ 1.06
COL16A1-215ENST00000488897 PHKA1P46020 1223 aa21.7■■□□□ 1.06
COL16A1-215ENST00000488897 CCDC183Q5T5S1 534 aa21.7■■□□□ 1.06
COL16A1-215ENST00000488897 FGFR2P21802 821 aa21.69■■□□□ 1.06
COL16A1-215ENST00000488897 VPS53Q5VIR6 699 aa21.69■■□□□ 1.06
COL16A1-215ENST00000488897 KCNB2Q92953 911 aa21.69■■□□□ 1.06
COL16A1-215ENST00000488897 EDC3Q96F86 508 aaKnown RBP21.69■■□□□ 1.06
COL16A1-215ENST00000488897 TCHHQ07283 1943 aa21.69■■□□□ 1.06
COL16A1-215ENST00000488897 SCARF1Q14162 830 aa21.69■■□□□ 1.06
COL16A1-215ENST00000488897 EVI5LQ96CN4 794 aa21.69■■□□□ 1.06
COL16A1-215ENST00000488897 TMX4Q9H1E5 349 aaPredicted RBP21.69■■□□□ 1.06
COL16A1-215ENST00000488897 DUOX1Q9NRD9 1551 aa21.69■■□□□ 1.06
COL16A1-215ENST00000488897 UBE2HP62256 183 aa21.68■■□□□ 1.06
COL16A1-215ENST00000488897 PUM3Q15397 648 aaKnown RBP21.68■■□□□ 1.06
COL16A1-215ENST00000488897 SH2B1Q9NRF2 756 aaPredicted RBP21.68■■□□□ 1.06
COL16A1-215ENST00000488897 F13A1P00488 732 aa21.68■■□□□ 1.06
COL16A1-215ENST00000488897 WASHC4Q2M389 1173 aa21.68■■□□□ 1.06
COL16A1-215ENST00000488897 CCDC93Q567U6 631 aa21.68■■□□□ 1.06
COL16A1-215ENST00000488897 PDRG1Q9NUG6 133 aa21.68■■□□□ 1.06
COL16A1-215ENST00000488897 CNPY2Q9Y2B0 182 aa21.68■■□□□ 1.06
COL16A1-215ENST00000488897 FAM84BQ96KN1 310 aaPredicted RBP21.67■■□□□ 1.06
COL16A1-215ENST00000488897 MXD3Q9BW11 206 aa21.67■■□□□ 1.06
COL16A1-215ENST00000488897 ZSWIM6Q9HCJ5 1215 aa21.67■■□□□ 1.06
COL16A1-215ENST00000488897 HIP1O00291 1037 aa21.67■■□□□ 1.06
COL16A1-215ENST00000488897 ANKRD2Q9GZV1 360 aa21.67■■□□□ 1.06
COL16A1-215ENST00000488897 CYP46A1Q9Y6A2 500 aa21.67■■□□□ 1.06
COL16A1-215ENST00000488897 PTH1RQ03431 593 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 GLIPR1L2Q4G1C9 344 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 GORABQ5T7V8 394 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 A0A1B0GUL6 1792 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 SNED1Q8TER0 1413 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 CHGBP05060 677 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 LPIN2Q92539 896 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 JAKMIP1Q96N16 626 aaKnown RBP21.66■■□□□ 1.06
COL16A1-215ENST00000488897 COL4A5P29400 1685 aa21.66■■□□□ 1.06
COL16A1-215ENST00000488897 PTMAP06454 111 aaKnown RBP21.65■■□□□ 1.06
COL16A1-215ENST00000488897 ZKSCAN1P17029 563 aaPredicted RBP21.65■■□□□ 1.06
COL16A1-215ENST00000488897 CCDC102BQ68D86 513 aa21.65■■□□□ 1.06
COL16A1-215ENST00000488897 BOLA2Q9H3K6 86 aa21.65■■□□□ 1.06
COL16A1-215ENST00000488897 ZNF609O15014 1411 aa21.65■■□□□ 1.06
COL16A1-215ENST00000488897 PPIP5K2O43314 1243 aa21.65■■□□□ 1.06
COL16A1-215ENST00000488897 LARP6Q9BRS8 491 aaKnown RBP21.65■■□□□ 1.06
COL16A1-215ENST00000488897 PODXL2Q9NZ53 605 aa21.65■■□□□ 1.06
COL16A1-215ENST00000488897 PDIA4P13667 645 aaKnown RBP21.64■■□□□ 1.05
COL16A1-215ENST00000488897 FBXW7Q969H0 707 aa21.64■■□□□ 1.05
COL16A1-215ENST00000488897 ZC3H12CQ9C0D7 883 aaKnown RBP21.64■■□□□ 1.05
COL16A1-215ENST00000488897 NECTIN1Q15223 517 aa21.64■■□□□ 1.05
COL16A1-215ENST00000488897 FBXO3Q9UK99 471 aa21.64■■□□□ 1.05
COL16A1-215ENST00000488897 R3HCC1Q9Y3T6 440 aaKnown RBP21.64■■□□□ 1.05
COL16A1-215ENST00000488897 LRRC37AA6NMS7 1700 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 CCDC171Q6TFL3 1326 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 IRS2Q9Y4H2 1338 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 SLC5A1P13866 664 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 CPA1P15085 419 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 GJB2P29033 226 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 VPS37DQ86XT2 251 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 CCDC83Q8IWF9 413 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 TAOK3Q9H2K8 898 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 IFIT1P09914 478 aaKnown RBP21.63■■□□□ 1.05
COL16A1-215ENST00000488897 ATP2B4P23634 1241 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 CHAF1AQ13111 956 aaPredicted RBP21.63■■□□□ 1.05
COL16A1-215ENST00000488897 UBE4AQ14139 1066 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 SLFNL1Q499Z3 407 aa21.63■■□□□ 1.05
COL16A1-215ENST00000488897 LARGE1O95461 756 aa21.62■■□□□ 1.05
COL16A1-215ENST00000488897 ADCK5Q3MIX3 580 aa21.62■■□□□ 1.05
COL16A1-215ENST00000488897 AKAP2Q9Y2D5 859 aa21.62■■□□□ 1.05
COL16A1-215ENST00000488897 LEMD3Q9Y2U8 911 aa21.62■■□□□ 1.05
COL16A1-215ENST00000488897 LTBP1Q14766 1721 aa21.61■■□□□ 1.05
COL16A1-215ENST00000488897 RTKN2Q8IZC4 609 aa21.61■■□□□ 1.05
COL16A1-215ENST00000488897 LARGE2Q8N3Y3 721 aa21.61■■□□□ 1.05
COL16A1-215ENST00000488897 DNAJC2Q99543 621 aaKnown RBP21.61■■□□□ 1.05
COL16A1-215ENST00000488897 MTMR6Q9Y217 621 aa21.61■■□□□ 1.05
COL16A1-215ENST00000488897 FKBP4Q02790 459 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL16A1-215ENST00000488897 CHD4Q14839 1912 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 YDJCA8MPS7 323 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 PSMA5P28066 241 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 HIBADHP31937 336 aaKnown RBP21.6■■□□□ 1.05
COL16A1-215ENST00000488897 MCAMP43121 646 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 TMC4Q7Z404 712 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 G3V3G9 751 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 FIBPO43427 364 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 RAD17O75943 681 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 GRIK5Q16478 980 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 DCAF8Q5TAQ9 597 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 MAP4K1Q92918 833 aa21.6■■□□□ 1.05
COL16A1-215ENST00000488897 RBM8AQ9Y5S9 174 aaKnown RBP21.6■■□□□ 1.05
COL16A1-215ENST00000488897 RASGRF1Q13972 1273 aa21.59■■□□□ 1.05
COL16A1-215ENST00000488897 TTC39AQ5SRH9 613 aa21.59■■□□□ 1.05
COL16A1-215ENST00000488897 CREB3L3Q68CJ9 461 aa21.59■■□□□ 1.05
COL16A1-215ENST00000488897 CCDC88AQ3V6T2 1871 aa21.59■■□□□ 1.05
COL16A1-215ENST00000488897 CD209Q9NNX6 404 aa21.59■■□□□ 1.05
COL16A1-215ENST00000488897 ZAP70P43403 619 aa21.58■■□□□ 1.05
COL16A1-215ENST00000488897 CAVIN4Q5BKX8 364 aa21.58■■□□□ 1.05
COL16A1-215ENST00000488897 RTFDC1Q9BY42 306 aaPredicted RBP21.58■■□□□ 1.05
COL16A1-215ENST00000488897 ECE2O60344 883 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms