RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 GGA3Q9NZ52 723 aa22.9■■□□□ 1.26
PTCD3-217ENST00000488801 PCDHAC2Q9Y5I4 1007 aa22.9■■□□□ 1.26
PTCD3-217ENST00000488801 AOX1Q06278 1338 aa22.89■■□□□ 1.26
PTCD3-217ENST00000488801 OTOFQ9HC10 1997 aa22.89■■□□□ 1.26
PTCD3-217ENST00000488801 AK9Q5TCS8 1911 aa22.89■■□□□ 1.25
PTCD3-217ENST00000488801 PRDX5P30044 214 aa22.89■■□□□ 1.25
PTCD3-217ENST00000488801 CFAP100Q494V2 611 aa22.89■■□□□ 1.25
PTCD3-217ENST00000488801 GORABQ5T7V8 394 aa22.89■■□□□ 1.25
PTCD3-217ENST00000488801 SPATA5Q8NB90 893 aa22.89■■□□□ 1.25
PTCD3-217ENST00000488801 LAMB1P07942 1786 aa22.89■■□□□ 1.25
PTCD3-217ENST00000488801 APBB1O00213 710 aa22.88■■□□□ 1.25
PTCD3-217ENST00000488801 CCDC158Q5M9N0 1113 aa22.88■■□□□ 1.25
PTCD3-217ENST00000488801 ZGPATQ8N5A5 531 aaKnown RBP22.88■■□□□ 1.25
PTCD3-217ENST00000488801 CRKP46108 304 aa22.87■■□□□ 1.25
PTCD3-217ENST00000488801 TTC39AQ5SRH9 613 aa22.87■■□□□ 1.25
PTCD3-217ENST00000488801 DLGAP5Q15398 846 aa22.86■■□□□ 1.25
PTCD3-217ENST00000488801 ANGEL2Q5VTE6 544 aaKnown RBP22.86■■□□□ 1.25
PTCD3-217ENST00000488801 HHIPL2Q6UWX4 724 aa22.86■■□□□ 1.25
PTCD3-217ENST00000488801 PRMT6Q96LA8 375 aaPredicted RBP22.86■■□□□ 1.25
PTCD3-217ENST00000488801 GLIS2Q9BZE0 524 aaPredicted RBP22.86■■□□□ 1.25
PTCD3-217ENST00000488801 THSD7BQ9C0I4 1608 aa22.86■■□□□ 1.25
PTCD3-217ENST00000488801 SMARCA5O60264 1052 aaPredicted RBP22.85■■□□□ 1.25
PTCD3-217ENST00000488801 APLP1P51693 650 aa22.85■■□□□ 1.25
PTCD3-217ENST00000488801 CDC37L1Q7L3B6 337 aa22.85■■□□□ 1.25
PTCD3-217ENST00000488801 ZNF384Q8TF68 577 aa22.85■■□□□ 1.25
PTCD3-217ENST00000488801 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.85■■□□□ 1.25
PTCD3-217ENST00000488801 ZDHHC15Q96MV8 337 aa22.85■■□□□ 1.25
PTCD3-217ENST00000488801 GAKO14976 1311 aa22.84■■□□□ 1.25
PTCD3-217ENST00000488801 TRAF5O00463 557 aa22.84■■□□□ 1.25
PTCD3-217ENST00000488801 LDHBP07195 334 aaKnown RBP22.84■■□□□ 1.25
PTCD3-217ENST00000488801 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
PTCD3-217ENST00000488801 TEKT1Q969V4 418 aa22.84■■□□□ 1.25
PTCD3-217ENST00000488801 CEP350Q5VT06 3117 aa22.84■■□□□ 1.25
PTCD3-217ENST00000488801 CYP2E1P05181 493 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-217ENST00000488801 IFIT2P09913 472 aaKnown RBP22.83■■□□□ 1.25
PTCD3-217ENST00000488801 FMR1Q06787 632 aaKnown RBP eCLIP22.83■■□□□ 1.25
PTCD3-217ENST00000488801 SPDYE2Q495Y8 402 aa22.83■■□□□ 1.25
PTCD3-217ENST00000488801 KRT26Q7Z3Y9 468 aa22.83■■□□□ 1.25
PTCD3-217ENST00000488801 SMC5Q8IY18 1101 aa22.83■■□□□ 1.25
PTCD3-217ENST00000488801 DCPSQ96C86 337 aaKnown RBP22.83■■□□□ 1.25
PTCD3-217ENST00000488801 GCC1Q96CN9 775 aa22.83■■□□□ 1.25
PTCD3-217ENST00000488801 RFX7Q2KHR2 1363 aa22.83■■□□□ 1.25
PTCD3-217ENST00000488801 DDX60LQ5H9U9 1706 aaKnown RBP22.82■■□□□ 1.24
PTCD3-217ENST00000488801 MYH1P12882 1939 aa22.82■■□□□ 1.24
PTCD3-217ENST00000488801 ADM5C9JUS6 153 aa22.82■■□□□ 1.24
PTCD3-217ENST00000488801 IGSF3O75054 1194 aa22.82■■□□□ 1.24
PTCD3-217ENST00000488801 DIXDC1Q155Q3 683 aa22.82■■□□□ 1.24
PTCD3-217ENST00000488801 APOBEC3HQ6NTF7 200 aaKnown RBP22.82■■□□□ 1.24
PTCD3-217ENST00000488801 DAGLAQ9Y4D2 1042 aa22.82■■□□□ 1.24
PTCD3-217ENST00000488801 SIPA1L1O43166 1804 aa22.82■■□□□ 1.24
PTCD3-217ENST00000488801 SALL3Q9BXA9 1300 aa22.82■■□□□ 1.24
PTCD3-217ENST00000488801 SSC5DA1L4H1 1573 aa22.81■■□□□ 1.24
PTCD3-217ENST00000488801 ZAP70P43403 619 aa22.81■■□□□ 1.24
PTCD3-217ENST00000488801 SPTY2D1Q68D10 685 aaPredicted RBP22.81■■□□□ 1.24
PTCD3-217ENST00000488801 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
PTCD3-217ENST00000488801 APOBEC3FQ8IUX4 373 aaKnown RBP22.81■■□□□ 1.24
PTCD3-217ENST00000488801 SNRKQ9NRH2 765 aa22.81■■□□□ 1.24
PTCD3-217ENST00000488801 IGHDP01880 384 aa22.8■■□□□ 1.24
PTCD3-217ENST00000488801 TBC1D9Q6ZT07 1266 aa22.8■■□□□ 1.24
PTCD3-217ENST00000488801 SULF1Q8IWU6 871 aa22.8■■□□□ 1.24
PTCD3-217ENST00000488801 NSUN4Q96CB9 384 aaKnown RBP22.8■■□□□ 1.24
PTCD3-217ENST00000488801 FAM163AQ96GL9 167 aaPredicted RBP22.8■■□□□ 1.24
PTCD3-217ENST00000488801 CREBZFQ9NS37 354 aa22.8■■□□□ 1.24
PTCD3-217ENST00000488801 ABCF2Q9UG63 623 aa22.8■■□□□ 1.24
PTCD3-217ENST00000488801 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
PTCD3-217ENST00000488801 ATP5JP18859 108 aa22.79■■□□□ 1.24
PTCD3-217ENST00000488801 MECOMQ03112 1051 aa22.79■■□□□ 1.24
PTCD3-217ENST00000488801 CST9Q5W186 159 aa22.79■■□□□ 1.24
PTCD3-217ENST00000488801 DLK2Q6UY11 383 aa22.79■■□□□ 1.24
PTCD3-217ENST00000488801 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
PTCD3-217ENST00000488801 ZNF70Q9UC06 446 aaPredicted RBP22.79■■□□□ 1.24
PTCD3-217ENST00000488801 MYO1BO43795 1136 aa22.78■■□□□ 1.24
PTCD3-217ENST00000488801 RBM5P52756 815 aaKnown RBP eCLIP22.78■■□□□ 1.24
PTCD3-217ENST00000488801 RWDD1Q9H446 243 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-217ENST00000488801 PIH1D3Q9NQM4 214 aaKnown RBP22.78■■□□□ 1.24
PTCD3-217ENST00000488801 MROH7-TTC4A0A0A0MT08 1334 aa22.78■■□□□ 1.24
PTCD3-217ENST00000488801 RPAP1Q9BWH6 1393 aaPredicted RBP22.77■■□□□ 1.24
PTCD3-217ENST00000488801 CLRN2A0PK11 232 aa22.77■■□□□ 1.24
PTCD3-217ENST00000488801 TMEM88BA6NKF7 163 aa22.77■■□□□ 1.24
PTCD3-217ENST00000488801 DZIP1Q86YF9 867 aaKnown RBP22.77■■□□□ 1.24
PTCD3-217ENST00000488801 CDCA5Q96FF9 252 aa22.77■■□□□ 1.24
PTCD3-217ENST00000488801 TDRD3Q9H7E2 651 aaKnown RBP22.77■■□□□ 1.24
PTCD3-217ENST00000488801 SCAF8Q9UPN6 1271 aaKnown RBP22.77■■□□□ 1.24
PTCD3-217ENST00000488801 PPP2R3BQ9Y5P8 575 aa22.77■■□□□ 1.24
PTCD3-217ENST00000488801 NDUFB9Q9Y6M9 179 aa22.77■■□□□ 1.24
PTCD3-217ENST00000488801 CNTNAP1P78357 1384 aa22.76■■□□□ 1.23
PTCD3-217ENST00000488801 FKBP1CQ5VVH2 108 aa22.76■■□□□ 1.23
PTCD3-217ENST00000488801 ANTXR1Q9H6X2 564 aa22.76■■□□□ 1.23
PTCD3-217ENST00000488801 OTUD7AQ8TE49 926 aaPredicted RBP22.75■■□□□ 1.23
PTCD3-217ENST00000488801 HAUS7Q99871 368 aa22.75■■□□□ 1.23
PTCD3-217ENST00000488801 ECHDC1Q9NTX5 307 aa22.75■■□□□ 1.23
PTCD3-217ENST00000488801 ATAD5Q96QE3 1844 aa22.75■■□□□ 1.23
PTCD3-217ENST00000488801 BAZ2AQ9UIF9 1905 aaKnown RBP22.74■■□□□ 1.23
PTCD3-217ENST00000488801 GPR75-ASB3A0A0A6YYF3 556 aa22.74■■□□□ 1.23
PTCD3-217ENST00000488801 CELF2O95319 508 aaKnown RBP22.74■■□□□ 1.23
PTCD3-217ENST00000488801 HTRA3P83110 453 aa22.74■■□□□ 1.23
PTCD3-217ENST00000488801 SLF2Q8IX21 1173 aa22.74■■□□□ 1.23
PTCD3-217ENST00000488801 DEFB129Q9H1M3 183 aa22.74■■□□□ 1.23
PTCD3-217ENST00000488801 TTC41PQ6P2S7 1318 aa22.74■■□□□ 1.23
PTCD3-217ENST00000488801 CDC42EP5Q6NZY7 148 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms