RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 HSP90AB3PQ58FF7 597 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-229ENST00000488765 A0A087WUV0 522 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-229ENST00000488765 NEBLO76041 1014 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 NCAPHQ15003 741 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 IL17RAQ96F46 866 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 MPHOSPH8Q99549 860 aa18.57■□□□□ 0.56
MCF2L-229ENST00000488765 PPFIA4O75335 1185 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 ZNF569Q5MCW4 686 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 RNF217Q8TC41 542 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 KCND1Q9NSA2 647 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 CAPN7Q9Y6W3 813 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 FAM169AQ9Y6X4 670 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 AGLP35573 1532 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 SOWAHDA6NJG2 315 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 PSMA5P28066 241 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 SCRN1Q12765 414 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 MKRN1Q9UHC7 482 aaKnown RBP18.56■□□□□ 0.56
MCF2L-229ENST00000488765 CLIC4Q9Y696 253 aa18.56■□□□□ 0.56
MCF2L-229ENST00000488765 SKAP2O75563 359 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-229ENST00000488765 NOA1Q8NC60 698 aaKnown RBP18.55■□□□□ 0.56
MCF2L-229ENST00000488765 GIMAP7Q8NHV1 300 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 FSD1Q9BTV5 496 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 MRPS25P82663 173 aaKnown RBP18.55■□□□□ 0.56
MCF2L-229ENST00000488765 GBP6Q6ZN66 633 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 AACSQ86V21 672 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 SUGP1Q8IWZ8 645 aaKnown RBP18.55■□□□□ 0.56
MCF2L-229ENST00000488765 MRPS27Q92552 414 aaKnown RBP18.55■□□□□ 0.56
MCF2L-229ENST00000488765 GOLIM4O00461 696 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 PAX7P23759 505 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 STK38Q15208 465 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 ERC1Q8IUD2 1116 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 KIFC2Q96AC6 838 aa18.55■□□□□ 0.56
MCF2L-229ENST00000488765 SSBP05455 408 aaKnown RBP eCLIP18.54■□□□□ 0.56
MCF2L-229ENST00000488765 ACTN3Q08043 901 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-229ENST00000488765 IGSF22Q8N9C0 903 aa18.54■□□□□ 0.56
MCF2L-229ENST00000488765 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-229ENST00000488765 RCOR1Q9UKL0 485 aa18.54■□□□□ 0.56
MCF2L-229ENST00000488765 CUTAO60888 179 aa18.54■□□□□ 0.56
MCF2L-229ENST00000488765 BRD3Q15059 726 aa18.54■□□□□ 0.56
MCF2L-229ENST00000488765 FMR1NBQ8N0W7 255 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-229ENST00000488765 AFAP1L1Q8TED9 768 aa18.54■□□□□ 0.56
MCF2L-229ENST00000488765 CDC5LQ99459 802 aaKnown RBP18.54■□□□□ 0.56
MCF2L-229ENST00000488765 BCCIPQ9P287 314 aaKnown RBP eCLIP18.54■□□□□ 0.56
MCF2L-229ENST00000488765 USP6P35125 1406 aa18.54■□□□□ 0.56
MCF2L-229ENST00000488765 GLRX3O76003 335 aaKnown RBP18.53■□□□□ 0.56
MCF2L-229ENST00000488765 LRCH2Q5VUJ6 765 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 NCAPH2Q6IBW4 605 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 CCP110O43303 1012 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 HOXC9P31274 260 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 BIRC2Q13490 618 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 TRMT44Q8IYL2 757 aaKnown RBP18.53■□□□□ 0.56
MCF2L-229ENST00000488765 CLASRPQ8N2M8 674 aaKnown RBP18.53■□□□□ 0.56
MCF2L-229ENST00000488765 CEP89Q96ST8 783 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 PLEKHG1Q9ULL1 1385 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 NAIF1Q69YI7 327 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-229ENST00000488765 SRGAP1Q7Z6B7 1085 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 TM6SF1Q9BZW5 370 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
MCF2L-229ENST00000488765 CCDC189A1A4V9 331 aa18.52■□□□□ 0.56
MCF2L-229ENST00000488765 ERLIN1O75477 346 aa18.52■□□□□ 0.56
MCF2L-229ENST00000488765 PNOCQ13519 176 aa18.52■□□□□ 0.56
MCF2L-229ENST00000488765 BCAS4Q8TDM0 211 aa18.52■□□□□ 0.56
MCF2L-229ENST00000488765 KAT14Q9H8E8 782 aa18.52■□□□□ 0.56
MCF2L-229ENST00000488765 TLR7Q9NYK1 1049 aaKnown RBP18.52■□□□□ 0.56
MCF2L-229ENST00000488765 ZNF202O95125 648 aa18.52■□□□□ 0.55
MCF2L-229ENST00000488765 SWT1Q5T5J6 900 aaKnown RBP18.52■□□□□ 0.55
MCF2L-229ENST00000488765 HSD3B7Q9H2F3 369 aa18.52■□□□□ 0.55
MCF2L-229ENST00000488765 SATB1Q01826 763 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 CEP57Q86XR8 500 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 MAP4K1Q92918 833 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 SGSM3Q96HU1 749 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 EBAG9O00559 213 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 TEFQ10587 303 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 SPECC1Q5M775 1068 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 N4BP2L2Q92802 583 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-229ENST00000488765 PTPDC1A2A3K4 754 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 ARHGAP6O43182 974 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 KCNQ3O43525 872 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 INPP5BP32019 993 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 TAF7Q15545 349 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-229ENST00000488765 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 PROSER2Q86WR7 435 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-229ENST00000488765 SSH3Q8TE77 659 aa18.51■□□□□ 0.55
MCF2L-229ENST00000488765 EGFL6Q8IUX8 553 aa18.5■□□□□ 0.55
MCF2L-229ENST00000488765 IL17REQ8NFR9 667 aa18.5■□□□□ 0.55
MCF2L-229ENST00000488765 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
MCF2L-229ENST00000488765 TMEM139Q8IV31 216 aa18.5■□□□□ 0.55
MCF2L-229ENST00000488765 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
MCF2L-229ENST00000488765 ECHDC1Q9NTX5 307 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 A0A0G2JLW4 131 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 ENC1O14682 589 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 COBLO75128 1261 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 ANKRD1Q15327 319 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 ILDR1Q86SU0 546 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-229ENST00000488765 FAM71BQ8TC56 605 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms