RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 NUTM2AQ8IVF1 878 aaPredicted RBP16.6■□□□□ 0.25
ABCB1-207ENST00000488737 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 SPC24Q8NBT2 197 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.25
ABCB1-207ENST00000488737 GPHNQ9NQX3 736 aaPredicted RBP16.6■□□□□ 0.25
ABCB1-207ENST00000488737 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
ABCB1-207ENST00000488737 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 DOT1LQ8TEK3 1739 aa16.6■□□□□ 0.25
ABCB1-207ENST00000488737 HSPA1LP34931 641 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 ME1P48163 572 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 IQCB1Q15051 598 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
ABCB1-207ENST00000488737 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 KCNG4Q8TDN1 519 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 MRPS27Q92552 414 aaKnown RBP16.59■□□□□ 0.25
ABCB1-207ENST00000488737 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 PDCL3Q9H2J4 239 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 CPLX1O14810 134 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 FGFR2P21802 821 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 ALX1Q15699 326 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 CCDC102BQ68D86 513 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
ABCB1-207ENST00000488737 LPIN2Q92539 896 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
ABCB1-207ENST00000488737 ANO10Q9NW15 660 aa16.59■□□□□ 0.25
ABCB1-207ENST00000488737 RREB1Q92766 1687 aa16.58■□□□□ 0.25
ABCB1-207ENST00000488737 CICQ96RK0 1608 aaPredicted RBP16.58■□□□□ 0.25
ABCB1-207ENST00000488737 EXOC5O00471 708 aa16.58■□□□□ 0.24
ABCB1-207ENST00000488737 LINC00301Q8NCQ3 95 aa16.58■□□□□ 0.24
ABCB1-207ENST00000488737 NBPF3Q9H094 633 aa16.58■□□□□ 0.24
ABCB1-207ENST00000488737 PCDHA7Q9UN72 937 aa16.58■□□□□ 0.24
ABCB1-207ENST00000488737 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
ABCB1-207ENST00000488737 LAMB2P55268 1798 aa16.58■□□□□ 0.24
ABCB1-207ENST00000488737 UBN2Q6ZU65 1347 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 TCRBV5S4A2TA0A5A2 114 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 GOLGA6L19H0YKK7 550 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 CDKL5O76039 1030 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 PDE6AP16499 860 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 MTERF4Q7Z6M4 381 aaKnown RBP16.57■□□□□ 0.24
ABCB1-207ENST00000488737 FMR1NBQ8N0W7 255 aaPredicted RBP16.57■□□□□ 0.24
ABCB1-207ENST00000488737 PYCARDQ9ULZ3 195 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 TIAM2Q8IVF5 1701 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 ECM29Q5VYK3 1845 aa16.57■□□□□ 0.24
ABCB1-207ENST00000488737 SH2B2O14492 632 aaPredicted RBP16.56■□□□□ 0.24
ABCB1-207ENST00000488737 ADAMTS2O95450 1211 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 PTGS1P23219 599 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 GTF2F1P35269 517 aaKnown RBP eCLIP16.56■□□□□ 0.24
ABCB1-207ENST00000488737 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
ABCB1-207ENST00000488737 SLC5A1P13866 664 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 PHKA1P46020 1223 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 STK38Q15208 465 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 C11orf57Q6ZUT1 292 aaPredicted RBP16.56■□□□□ 0.24
ABCB1-207ENST00000488737 TBC1D10CQ8IV04 446 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 DRC7Q8IY82 874 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 MRFAP1L1Q96HT8 127 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 SLIT2O94813 1529 aa16.56■□□□□ 0.24
ABCB1-207ENST00000488737 KIF23Q02241 960 aaPredicted RBP16.55■□□□□ 0.24
ABCB1-207ENST00000488737 CCDC186Q7Z3E2 898 aa16.55■□□□□ 0.24
ABCB1-207ENST00000488737 C17orf53Q8N3J3 647 aaPredicted RBP16.55■□□□□ 0.24
ABCB1-207ENST00000488737 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
ABCB1-207ENST00000488737 SPTLC2O15270 562 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 SF3A1Q15459 793 aaKnown RBP16.54■□□□□ 0.24
ABCB1-207ENST00000488737 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
ABCB1-207ENST00000488737 SYNE3Q6ZMZ3 975 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 CEP57L1Q8IYX8 460 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 STRBPQ96SI9 672 aaKnown RBP16.54■□□□□ 0.24
ABCB1-207ENST00000488737 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
ABCB1-207ENST00000488737 RTL9Q8NET4 1388 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 METAP2P50579 478 aaKnown RBP eCLIP16.54■□□□□ 0.24
ABCB1-207ENST00000488737 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
ABCB1-207ENST00000488737 OTUD7BQ6GQQ9 843 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 CYB5R4Q7L1T6 521 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 AIDAQ96BJ3 306 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 CLIC4Q9Y696 253 aa16.54■□□□□ 0.24
ABCB1-207ENST00000488737 APPP05067 770 aa16.53■□□□□ 0.24
ABCB1-207ENST00000488737 NRAPQ86VF7 1730 aa16.53■□□□□ 0.24
ABCB1-207ENST00000488737 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
ABCB1-207ENST00000488737 BCORQ6W2J9 1755 aa16.53■□□□□ 0.24
ABCB1-207ENST00000488737 BECN2A8MW95 431 aa16.52■□□□□ 0.24
ABCB1-207ENST00000488737 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.24
ABCB1-207ENST00000488737 NEMFO60524 1076 aa16.52■□□□□ 0.24
ABCB1-207ENST00000488737 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
ABCB1-207ENST00000488737 PARP10Q53GL7 1025 aa16.52■□□□□ 0.24
ABCB1-207ENST00000488737 ANO1Q5XXA6 986 aa16.52■□□□□ 0.24
ABCB1-207ENST00000488737 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
ABCB1-207ENST00000488737 BPIFA3Q9BQP9 254 aa16.52■□□□□ 0.24
ABCB1-207ENST00000488737 NID2Q14112 1375 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms