RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IDH1O75874 414 aaKnown RBP30.5■■■□□ 2.47
HLA-C-208ENST00000487245 PDE6AP16499 860 aa30.5■■■□□ 2.47
HLA-C-208ENST00000487245 BARGINQ6ZT62 677 aa30.5■■■□□ 2.47
HLA-C-208ENST00000487245 MTERF4Q7Z6M4 381 aaKnown RBP30.5■■■□□ 2.47
HLA-C-208ENST00000487245 MARCH10Q8NA82 808 aaPredicted RBP30.5■■■□□ 2.47
HLA-C-208ENST00000487245 ALX1Q15699 326 aa30.5■■■□□ 2.47
HLA-C-208ENST00000487245 DNTTIP2Q5QJE6 756 aaKnown RBP30.5■■■□□ 2.47
HLA-C-208ENST00000487245 ZNF532Q9HCE3 1301 aa30.49■■■□□ 2.47
HLA-C-208ENST00000487245 GTF2F1P35269 517 aaKnown RBP eCLIP30.49■■■□□ 2.47
HLA-C-208ENST00000487245 ZNF165P49910 485 aa30.49■■■□□ 2.47
HLA-C-208ENST00000487245 ZNF75DP51815 510 aa30.49■■■□□ 2.47
HLA-C-208ENST00000487245 GLIPR1L2Q4G1C9 344 aa30.49■■■□□ 2.47
HLA-C-208ENST00000487245 SLIT2O94813 1529 aa30.49■■■□□ 2.47
HLA-C-208ENST00000487245 KLF18A0A0U1RQI7 1052 aa30.48■■■□□ 2.47
HLA-C-208ENST00000487245 CCAR1Q8IX12 1150 aaKnown RBP30.48■■■□□ 2.47
HLA-C-208ENST00000487245 USP28Q96RU2 1077 aa30.48■■■□□ 2.47
HLA-C-208ENST00000487245 PHLPP1O60346 1717 aa30.48■■■□□ 2.47
HLA-C-208ENST00000487245 ZMYM6O95789 1325 aa30.48■■■□□ 2.47
HLA-C-208ENST00000487245 CDC25BP30305 580 aa30.48■■■□□ 2.47
HLA-C-208ENST00000487245 SPATA5Q8NB90 893 aa30.48■■■□□ 2.47
HLA-C-208ENST00000487245 ACSBG1Q96GR2 724 aa30.48■■■□□ 2.47
HLA-C-208ENST00000487245 TCRBV5S4A2TA0A5A2 114 aa30.47■■■□□ 2.47
HLA-C-208ENST00000487245 FDPSP14324 419 aaKnown RBP30.47■■■□□ 2.47
HLA-C-208ENST00000487245 ANTXR2P58335 489 aa30.47■■■□□ 2.47
HLA-C-208ENST00000487245 ENGASEQ8NFI3 743 aa30.47■■■□□ 2.47
HLA-C-208ENST00000487245 PYCARDQ9ULZ3 195 aa30.47■■■□□ 2.47
HLA-C-208ENST00000487245 A0A0G2JS52 829 aa30.46■■■□□ 2.47
HLA-C-208ENST00000487245 IGHMBP2P38935 993 aaKnown RBP30.46■■■□□ 2.47
HLA-C-208ENST00000487245 MAP3K12Q12852 859 aa30.46■■■□□ 2.47
HLA-C-208ENST00000487245 CCDC73Q6ZRK6 1079 aa30.46■■■□□ 2.47
HLA-C-208ENST00000487245 ILDR1Q86SU0 546 aaPredicted RBP30.46■■■□□ 2.47
HLA-C-208ENST00000487245 SPC24Q8NBT2 197 aa30.46■■■□□ 2.47
HLA-C-208ENST00000487245 ZNF652Q9Y2D9 606 aa30.46■■■□□ 2.47
HLA-C-208ENST00000487245 SNW1Q13573 536 aaKnown RBP30.46■■■□□ 2.47
HLA-C-208ENST00000487245 SARM1Q6SZW1 724 aa30.46■■■□□ 2.47
HLA-C-208ENST00000487245 HELBQ8NG08 1087 aaPredicted RBP30.46■■■□□ 2.47
HLA-C-208ENST00000487245 DNAJC25Q9H1X3 360 aa30.46■■■□□ 2.47
HLA-C-208ENST00000487245 GOLGA8BA8MQT2 603 aa30.45■■■□□ 2.47
HLA-C-208ENST00000487245 FAM160A1Q05DH4 1040 aa30.45■■■□□ 2.47
HLA-C-208ENST00000487245 ITPK1Q13572 414 aa30.45■■■□□ 2.47
HLA-C-208ENST00000487245 STX1AQ16623 288 aa30.45■■■□□ 2.47
HLA-C-208ENST00000487245 AIDAQ96BJ3 306 aa30.45■■■□□ 2.47
HLA-C-208ENST00000487245 STRBPQ96SI9 672 aaKnown RBP30.45■■■□□ 2.47
HLA-C-208ENST00000487245 RTEL1Q9NZ71 1219 aa30.45■■■□□ 2.47
HLA-C-208ENST00000487245 APPP05067 770 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 IQCB1Q15051 598 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 C17orf53Q8N3J3 647 aaPredicted RBP30.44■■■□□ 2.46
HLA-C-208ENST00000487245 GOLPH3LQ9H4A5 285 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 GPHNQ9NQX3 736 aaPredicted RBP30.44■■■□□ 2.46
HLA-C-208ENST00000487245 HPS5Q9UPZ3 1129 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 C4AP0C0L4 1744 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 C4BP0C0L5 1744 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 LAMB2P55268 1798 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 NTSR2O95665 410 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 WWC3Q9ULE0 1092 aa30.44■■■□□ 2.46
HLA-C-208ENST00000487245 NIP7Q9Y221 180 aaKnown RBP eCLIP30.44■■■□□ 2.46
HLA-C-208ENST00000487245 PATL2C9JE40 543 aaKnown RBP30.43■■■□□ 2.46
HLA-C-208ENST00000487245 CPLX1O14810 134 aa30.43■■■□□ 2.46
HLA-C-208ENST00000487245 A0A1W2PQ27 194 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 A0A1W2PQ64 194 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 A0A1W2PQD8 194 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 FOSBP53539 338 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 C8orf76Q96K31 380 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 TMEM87BQ96K49 555 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 TRIM5Q9C035 493 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 ANGEL1Q9UNK9 670 aaKnown RBP30.42■■■□□ 2.46
HLA-C-208ENST00000487245 PTGS1P23219 599 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 CEBPZQ03701 1054 aaKnown RBP30.42■■■□□ 2.46
HLA-C-208ENST00000487245 CLEC4GQ6UXB4 293 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 NBPF3Q9H094 633 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 SEC31BQ9NQW1 1179 aa30.42■■■□□ 2.46
HLA-C-208ENST00000487245 ORC3Q9UBD5 711 aaPredicted RBP30.42■■■□□ 2.46
HLA-C-208ENST00000487245 RBM10P98175 930 aaKnown RBP30.41■■■□□ 2.46
HLA-C-208ENST00000487245 FTOQ9C0B1 505 aaKnown RBP eCLIP30.41■■■□□ 2.46
HLA-C-208ENST00000487245 DOCK2Q92608 1830 aa30.41■■■□□ 2.46
HLA-C-208ENST00000487245 FAM177BA6PVY3 158 aa30.4■■■□□ 2.46
HLA-C-208ENST00000487245 KINO60870 393 aaKnown RBP30.4■■■□□ 2.46
HLA-C-208ENST00000487245 RASGRF1Q13972 1273 aa30.4■■■□□ 2.46
HLA-C-208ENST00000487245 MYO5AQ9Y4I1 1855 aaKnown RBP30.4■■■□□ 2.46
HLA-C-208ENST00000487245 BRAPQ7Z569 592 aa30.4■■■□□ 2.46
HLA-C-208ENST00000487245 TBC1D10CQ8IV04 446 aa30.4■■■□□ 2.46
HLA-C-208ENST00000487245 FAM13BQ9NYF5 915 aa30.4■■■□□ 2.46
HLA-C-208ENST00000487245 CDKL5O76039 1030 aa30.39■■■□□ 2.46
HLA-C-208ENST00000487245 GNAT2P19087 354 aa30.39■■■□□ 2.46
HLA-C-208ENST00000487245 ADALQ6DHV7 355 aa30.39■■■□□ 2.46
HLA-C-208ENST00000487245 CCDC186Q7Z3E2 898 aa30.39■■■□□ 2.46
HLA-C-208ENST00000487245 FBXO18Q8NFZ0 1043 aa30.39■■■□□ 2.46
HLA-C-208ENST00000487245 CDC5LQ99459 802 aaKnown RBP30.39■■■□□ 2.46
HLA-C-208ENST00000487245 ZNF831Q5JPB2 1677 aa30.39■■■□□ 2.46
HLA-C-208ENST00000487245 SH2B2O14492 632 aaPredicted RBP30.38■■■□□ 2.45
HLA-C-208ENST00000487245 RGL2O15211 777 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 YEATS4O95619 227 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 GUCY1B3Q02153 619 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 FSIP1Q8NA03 581 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 MRFAP1L1Q96HT8 127 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 ANO10Q9NW15 660 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 MYH14Q7Z406 1995 aaKnown RBP30.38■■■□□ 2.45
HLA-C-208ENST00000487245 CPLX2Q6PUV4 134 aaKnown RBP30.38■■■□□ 2.45
HLA-C-208ENST00000487245 MAGEB6Q8N7X4 407 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 MRPS27Q92552 414 aaKnown RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms