RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 LGR6Q9HBX8 967 aa8.74□□□□□ -1.01
COL6A4P1-202ENST00000487147 JADE2Q9NQC1 790 aa8.74□□□□□ -1.01
COL6A4P1-202ENST00000487147 HELLSQ9NRZ9 838 aa8.74□□□□□ -1.01
COL6A4P1-202ENST00000487147 FANCLQ9NW38 375 aa8.74□□□□□ -1.01
COL6A4P1-202ENST00000487147 ABCC3O15438 1527 aa8.74□□□□□ -1.01
COL6A4P1-202ENST00000487147 MYO1CO00159 1063 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CYP21A2P08686 494 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 IBSPP21815 317 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 PNOCQ13519 176 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 UBAC1Q9BSL1 405 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 RTEL1Q9NZ71 1219 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 GUCA1BQ9UMX6 200 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 ARHGEF40Q8TER5 1519 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CCDC196A0A1B0GTZ2 297 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 RNF113AO15541 343 aaKnown RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 ATP5JP18859 108 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 TDO2P48775 406 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CKAP4Q07065 602 aaKnown RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 TUBB2AQ13885 445 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 SPA17Q15506 151 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 FCHSD1Q86WN1 690 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 NAPGQ99747 312 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 TUBB2BQ9BVA1 445 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 PARD6BQ9BYG5 372 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 TLR7Q9NYK1 1049 aaKnown RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 E7EWF7 191 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 RXRAP19793 462 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 PTPN21Q16825 1174 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 RNF187Q5TA31 235 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 NYAP1Q6ZVC0 841 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CNGA4Q8IV77 575 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CTCFLQ8NI51 663 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 NAPBQ9H115 298 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 DDX21Q9NR30 783 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CLIC4Q9Y696 253 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 ARHGAP31Q2M1Z3 1444 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 ADGRB3O60242 1522 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CCDC151A5D8V7 595 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 MARCH6O60337 910 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 ZFYP08048 801 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CMA1P23946 247 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 GYS2P54840 703 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 CABP4P57796 275 aa8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 ZNF274Q96GC6 653 aaPredicted RBP8.73□□□□□ -1.01
COL6A4P1-202ENST00000487147 MYO1BO43795 1136 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 STX10O60499 249 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 ATP1A3P13637 1013 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 PAFAH1B1P43034 410 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 MATR3P43243 847 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 E4F1Q66K89 784 aaPredicted RBP8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 MICALCLQ6ZW33 695 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 GOLPH3LQ9H4A5 285 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 ADAM21Q9UKJ8 722 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 IKBKBO14920 756 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 ADCY9O60503 1353 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 TIMM10P62072 90 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 ODF2Q5BJF6 829 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 DHX40Q8IX18 779 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 MLKLQ8NB16 471 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 FAM76AQ8TAV0 307 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 DHX58Q96C10 678 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 CAPZA3Q96KX2 299 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 TMEM51Q9NW97 253 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 TTF2Q9UNY4 1162 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 KCNQ3O43525 872 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 SPAG1Q07617 926 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 SPECC1Q5M775 1068 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 CC2D1AQ6P1N0 951 aaPredicted RBP8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 EFCC1Q9HA90 598 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 SHPRHQ149N8 1683 aa8.72□□□□□ -1.01
COL6A4P1-202ENST00000487147 PDIA3P30101 505 aaKnown RBP8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 IL15P40933 162 aaPredicted RBP8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 METTL24Q5JXM2 366 aa8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 EPC1Q9H2F5 836 aa8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 SALL3Q9BXA9 1300 aa8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 USO1O60763 962 aaKnown RBP8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 CUTAO60888 179 aa8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 CCDC91Q7Z6B0 441 aa8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 SRGAP1Q7Z6B7 1085 aa8.71□□□□□ -1.01
COL6A4P1-202ENST00000487147 POLR2DO15514 142 aaKnown RBP8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 RRAGBQ5VZM2 374 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 ARMCX5Q6P1M9 558 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 RGS22Q8NE09 1264 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 FBXO18Q8NFZ0 1043 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 DSCC1Q9BVC3 393 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 UHRF1BP1LA0JNW5 1464 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 COL3A1P02461 1466 aaPredicted RBP8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 PLEKHG3A1L390 1219 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 MYCNP04198 464 aaPredicted RBP8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 VPS37DQ86XT2 251 aa8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 LUC7LQ9NQ29 371 aaKnown RBP8.71□□□□□ -1.02
COL6A4P1-202ENST00000487147 CCT6AP40227 531 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms