RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 RCAN3Q9UKA8 241 aa13.66□□□□□ -0.22
SNX21-211ENST00000486336 AOX1Q06278 1338 aa13.65□□□□□ -0.22
SNX21-211ENST00000486336 A0A1B0GUL7 405 aa13.65□□□□□ -0.22
SNX21-211ENST00000486336 FKBP1BP68106 108 aa13.65□□□□□ -0.22
SNX21-211ENST00000486336 NOGQ13253 232 aa13.65□□□□□ -0.22
SNX21-211ENST00000486336 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
SNX21-211ENST00000486336 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
SNX21-211ENST00000486336 ZIC5Q96T25 663 aa13.65□□□□□ -0.22
SNX21-211ENST00000486336 PCNTO95613 3336 aa13.64□□□□□ -0.23
SNX21-211ENST00000486336 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
SNX21-211ENST00000486336 SURF6O75683 361 aaKnown RBP13.64□□□□□ -0.23
SNX21-211ENST00000486336 LBX1P52954 281 aa13.64□□□□□ -0.23
SNX21-211ENST00000486336 CCDC102BQ68D86 513 aa13.64□□□□□ -0.23
SNX21-211ENST00000486336 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
SNX21-211ENST00000486336 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
SNX21-211ENST00000486336 DENND2AQ9ULE3 1009 aa13.64□□□□□ -0.23
SNX21-211ENST00000486336 KIF23Q02241 960 aaPredicted RBP13.63□□□□□ -0.23
SNX21-211ENST00000486336 POLA2Q14181 598 aa13.63□□□□□ -0.23
SNX21-211ENST00000486336 RASA3Q14644 834 aa13.63□□□□□ -0.23
SNX21-211ENST00000486336 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
SNX21-211ENST00000486336 TSKSQ9UJT2 592 aa13.63□□□□□ -0.23
SNX21-211ENST00000486336 ANGEL1Q9UNK9 670 aaKnown RBP13.63□□□□□ -0.23
SNX21-211ENST00000486336 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
SNX21-211ENST00000486336 SUGT1Q9Y2Z0 365 aa13.63□□□□□ -0.23
SNX21-211ENST00000486336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.63□□□□□ -0.23
SNX21-211ENST00000486336 MAST3O60307 1309 aa13.63□□□□□ -0.23
SNX21-211ENST00000486336 FAM155AB1AL88 458 aaPredicted RBP13.62□□□□□ -0.23
SNX21-211ENST00000486336 LDHBP07195 334 aaKnown RBP13.62□□□□□ -0.23
SNX21-211ENST00000486336 HDLBPQ00341 1268 aaKnown RBP13.62□□□□□ -0.23
SNX21-211ENST00000486336 TNFAIP1Q13829 316 aa13.62□□□□□ -0.23
SNX21-211ENST00000486336 MVPQ14764 893 aaKnown RBP13.62□□□□□ -0.23
SNX21-211ENST00000486336 SUPT20HL1Q3ZLR7 823 aa13.62□□□□□ -0.23
SNX21-211ENST00000486336 NBPF12Q5TAG4 269 aaPredicted RBP13.62□□□□□ -0.23
SNX21-211ENST00000486336 TNS4Q8IZW8 715 aa13.62□□□□□ -0.23
SNX21-211ENST00000486336 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
SNX21-211ENST00000486336 TMOD2Q9NZR1 351 aa13.62□□□□□ -0.23
SNX21-211ENST00000486336 COG6Q9Y2V7 657 aa13.62□□□□□ -0.23
SNX21-211ENST00000486336 PPP2R3BQ9Y5P8 575 aa13.62□□□□□ -0.23
SNX21-211ENST00000486336 SEMA3EO15041 775 aa13.61□□□□□ -0.23
SNX21-211ENST00000486336 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
SNX21-211ENST00000486336 SLC10A3P09131 477 aa13.61□□□□□ -0.23
SNX21-211ENST00000486336 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
SNX21-211ENST00000486336 TNNI2P48788 182 aa13.61□□□□□ -0.23
SNX21-211ENST00000486336 CACNB3P54284 484 aa13.61□□□□□ -0.23
SNX21-211ENST00000486336 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
SNX21-211ENST00000486336 RASAL3Q86YV0 1011 aa13.61□□□□□ -0.23
SNX21-211ENST00000486336 YTHDC1Q96MU7 727 aaKnown RBP13.61□□□□□ -0.23
SNX21-211ENST00000486336 ABCF2Q9UG63 623 aa13.61□□□□□ -0.23
SNX21-211ENST00000486336 PAPPA2Q9BXP8 1791 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 PRDX5P30044 214 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 RASGRF1Q13972 1273 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 DIXDC1Q155Q3 683 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 CEP85Q6P2H3 762 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 HHIPL2Q6UWX4 724 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
SNX21-211ENST00000486336 ZDHHC15Q96MV8 337 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 MRIQ9BWK5 157 aa13.6□□□□□ -0.23
SNX21-211ENST00000486336 COL1A1P02452 1464 aaPredicted RBP13.6□□□□□ -0.23
SNX21-211ENST00000486336 MYH13Q9UKX3 1938 aa13.59□□□□□ -0.23
SNX21-211ENST00000486336 APOBEC3HQ6NTF7 200 aaKnown RBP13.59□□□□□ -0.23
SNX21-211ENST00000486336 ZGPATQ8N5A5 531 aaKnown RBP13.59□□□□□ -0.23
SNX21-211ENST00000486336 SLC10A4Q96EP9 437 aa13.59□□□□□ -0.23
SNX21-211ENST00000486336 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
SNX21-211ENST00000486336 BCL11AQ9H165 835 aa13.59□□□□□ -0.23
SNX21-211ENST00000486336 PRDM10Q9NQV6 1147 aa13.59□□□□□ -0.23
SNX21-211ENST00000486336 DDX19BQ9UMR2 479 aa13.59□□□□□ -0.23
SNX21-211ENST00000486336 ARAP2Q8WZ64 1704 aa13.59□□□□□ -0.23
SNX21-211ENST00000486336 ECM29Q5VYK3 1845 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 IREB2P48200 963 aaKnown RBP13.58□□□□□ -0.24
SNX21-211ENST00000486336 TNNI3KQ59H18 835 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 SPTY2D1Q68D10 685 aaPredicted RBP13.58□□□□□ -0.24
SNX21-211ENST00000486336 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.24
SNX21-211ENST00000486336 CSRNP1Q96S65 589 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 FPGT-TNNI3KV9GXZ4 949 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 SALL1Q9NSC2 1324 aa13.58□□□□□ -0.24
SNX21-211ENST00000486336 CA12O43570 354 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 USP2O75604 605 aaPredicted RBP13.57□□□□□ -0.24
SNX21-211ENST00000486336 TRPA1O75762 1119 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 UQCRFS1P1P0C7P4 283 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 CCDC158Q5M9N0 1113 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 LDLRAD1Q5T700 205 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 ERICH6Q7L0X2 663 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 CDAN1Q8IWY9 1227 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 SPATA5Q8NB90 893 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 CCDC8Q9H0W5 538 aaPredicted RBP13.57□□□□□ -0.24
SNX21-211ENST00000486336 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
SNX21-211ENST00000486336 USP40Q9NVE5 1235 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 HMG20BQ9P0W2 317 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
SNX21-211ENST00000486336 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
SNX21-211ENST00000486336 APBB1O00213 710 aa13.56□□□□□ -0.24
SNX21-211ENST00000486336 TCP10Q12799 353 aa13.56□□□□□ -0.24
SNX21-211ENST00000486336 CDC42EP5Q6NZY7 148 aa13.56□□□□□ -0.24
SNX21-211ENST00000486336 PI16Q6UXB8 463 aa13.56□□□□□ -0.24
SNX21-211ENST00000486336 TBC1D9Q6ZT07 1266 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms