RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 UQCRFS1P1P0C7P4 283 aa17.5■□□□□ 0.39
POLR2J3-204ENST00000486319 MCMDC2Q4G0Z9 681 aa17.5■□□□□ 0.39
POLR2J3-204ENST00000486319 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
POLR2J3-204ENST00000486319 MAP4K1Q92918 833 aa17.5■□□□□ 0.39
POLR2J3-204ENST00000486319 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
POLR2J3-204ENST00000486319 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
POLR2J3-204ENST00000486319 MCM2P49736 904 aa17.49■□□□□ 0.39
POLR2J3-204ENST00000486319 PTH1RQ03431 593 aa17.49■□□□□ 0.39
POLR2J3-204ENST00000486319 PODNQ7Z5L7 613 aa17.49■□□□□ 0.39
POLR2J3-204ENST00000486319 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
POLR2J3-204ENST00000486319 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
POLR2J3-204ENST00000486319 ZFYP08048 801 aaPredicted RBP17.48■□□□□ 0.39
POLR2J3-204ENST00000486319 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
POLR2J3-204ENST00000486319 TXNRD3Q86VQ6 643 aa17.48■□□□□ 0.39
POLR2J3-204ENST00000486319 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
POLR2J3-204ENST00000486319 ANTXR1Q9H6X2 564 aa17.48■□□□□ 0.39
POLR2J3-204ENST00000486319 SNAP23O00161 211 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 NEK4P51957 841 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 TTF1Q15361 905 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 CCDC102BQ68D86 513 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 USP50Q70EL3 339 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 KCNB2Q92953 911 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 COA1Q9GZY4 146 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 ADARB2Q9NS39 739 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 CNOT7Q9UIV1 285 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 SNX14Q9Y5W7 946 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 SCN4AP35499 1836 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 H7C1D1 291 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 RNF113AO15541 343 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 VIL1P09327 827 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 RPS12P25398 132 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 KLRK1P26718 216 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 APLP1P51693 650 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 DPF2Q92785 391 aa17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 MYO5AQ9Y4I1 1855 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-204ENST00000486319 DOCK2Q92608 1830 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 USP17L3A6NCW0 530 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 USP17L4A6NCW7 530 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 MCAMP43121 646 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 ZAP70P43403 619 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 SCARF1Q14162 830 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 ZMYM1Q5SVZ6 1142 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 ZSCAN25Q6NSZ9 544 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 USP17L1Q7RTZ2 530 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 MICALL2Q8IY33 904 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 SPRYD3Q8NCJ5 442 aa17.46■□□□□ 0.39
POLR2J3-204ENST00000486319 PHKA1P46020 1223 aa17.45■□□□□ 0.38
POLR2J3-204ENST00000486319 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
POLR2J3-204ENST00000486319 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.45■□□□□ 0.38
POLR2J3-204ENST00000486319 CEP350Q5VT06 3117 aa17.45■□□□□ 0.38
POLR2J3-204ENST00000486319 RSBN1LQ6PCB5 846 aaPredicted RBP17.44■□□□□ 0.38
POLR2J3-204ENST00000486319 C15orf52Q6ZUT6 534 aaKnown RBP17.44■□□□□ 0.38
POLR2J3-204ENST00000486319 TM6SF1Q9BZW5 370 aa17.44■□□□□ 0.38
POLR2J3-204ENST00000486319 CHMP5Q9NZZ3 219 aa17.44■□□□□ 0.38
POLR2J3-204ENST00000486319 HMG20BQ9P0W2 317 aa17.44■□□□□ 0.38
POLR2J3-204ENST00000486319 MYH13Q9UKX3 1938 aa17.43■□□□□ 0.38
POLR2J3-204ENST00000486319 SHTN1A0MZ66 631 aa17.43■□□□□ 0.38
POLR2J3-204ENST00000486319 MAP1SQ66K74 1059 aaPredicted RBP17.43■□□□□ 0.38
POLR2J3-204ENST00000486319 CREB3L3Q68CJ9 461 aa17.43■□□□□ 0.38
POLR2J3-204ENST00000486319 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
POLR2J3-204ENST00000486319 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
POLR2J3-204ENST00000486319 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
POLR2J3-204ENST00000486319 ZNF804AQ7Z570 1209 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 AGBL3Q8NEM8 1001 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 SEC62Q99442 399 aaKnown RBP17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 SLC27A2O14975 620 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 STRIP1Q5VSL9 837 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 TTLL5Q6EMB2 1281 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 PI16Q6UXB8 463 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 SPATA5Q8NB90 893 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 DSCC1Q9BVC3 393 aa17.42■□□□□ 0.38
POLR2J3-204ENST00000486319 MAST3O60307 1309 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 IRS2Q9Y4H2 1338 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 ITGBL1O95965 494 aaPredicted RBP17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 PSMA5P28066 241 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 HIRAP54198 1017 aaPredicted RBP17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 TSGA10IPQ3SY00 556 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 CCDC129Q6ZRS4 1044 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 TRPM4Q8TD43 1214 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 APPBP2Q92624 585 aa17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
POLR2J3-204ENST00000486319 CHGBP05060 677 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 DDIT3P35638 169 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 GTF2IP78347 998 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 HTRA3P83110 453 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 KRT32Q14532 448 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 TBC1D10BQ4KMP7 808 aaPredicted RBP17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 DACT2Q5SW24 774 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 732.2 ms