RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 MAGEB6Q8N7X4 407 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 CNBD1Q8NA66 436 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 TMEM87BQ96K49 555 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 NACAP1Q9BZK3 213 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 CNNM2Q9H8M5 875 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 IRS2Q9Y4H2 1338 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 NID2Q14112 1375 aa14.1□□□□□ -0.15
PKP4-213ENST00000486254 PHF14O94880 888 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 PDIA3P30101 505 aaKnown RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 NT5C2P49902 561 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 GRAPQ13588 217 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 GIMAP6Q6P9H5 292 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 NSUN7Q8NE18 718 aaKnown RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 GRAPLQ8TC17 118 aaPredicted RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 FAM84BQ96KN1 310 aaPredicted RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 ZSCAN16Q9H4T2 348 aaPredicted RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 LRRC37AA6NMS7 1700 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 CCDC88AQ3V6T2 1871 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 PRC1O43663 620 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 MBD4O95243 580 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 PCP11498 1178 aaKnown RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 RCAN1P53805 252 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 ZSCAN23Q3MJ62 389 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 ZNF772Q68DY9 489 aaPredicted RBP14.09□□□□□ -0.15
PKP4-213ENST00000486254 ATL3Q6DD88 541 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 NBPF3Q9H094 633 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 LEMD3Q9Y2U8 911 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 NRXN2Q9P2S2 1712 aa14.09□□□□□ -0.15
PKP4-213ENST00000486254 MYH15Q9Y2K3 1946 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 A0A0G2JLW4 131 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 SNAP23O00161 211 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 ANTXR2P58335 489 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 KRT85P78386 507 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 CAVIN1Q6NZI2 390 aaKnown RBP14.08□□□□□ -0.16
PKP4-213ENST00000486254 SGMS1Q86VZ5 419 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 IFNL3Q8IZI9 196 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 SCAND2PQ9GZW5 306 aaPredicted RBP14.08□□□□□ -0.16
PKP4-213ENST00000486254 NAPBQ9H115 298 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 EPB41L4AQ9HCS5 686 aaPredicted RBP14.08□□□□□ -0.16
PKP4-213ENST00000486254 LRP2BPQ9P2M1 347 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 ANAPC4Q9UJX5 808 aa14.08□□□□□ -0.16
PKP4-213ENST00000486254 ANGEL1Q9UNK9 670 aaKnown RBP14.08□□□□□ -0.16
PKP4-213ENST00000486254 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
PKP4-213ENST00000486254 GSG1L2A8MUP6 293 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 PLSCR1O15162 318 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 XRCC6P12956 609 aaKnown RBP eCLIP14.07□□□□□ -0.16
PKP4-213ENST00000486254 GYS1P13807 737 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
PKP4-213ENST00000486254 APOBRQ0VD83 1088 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
PKP4-213ENST00000486254 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 TMC4Q7Z404 712 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 USP48Q86UV5 1035 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 VPS37DQ86XT2 251 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 TBC1D10CQ8IV04 446 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 STAG1Q8WVM7 1258 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
PKP4-213ENST00000486254 KRT23Q9C075 422 aa14.07□□□□□ -0.16
PKP4-213ENST00000486254 RNF41Q9H4P4 317 aaPredicted RBP14.07□□□□□ -0.16
PKP4-213ENST00000486254 PTPDC1A2A3K4 754 aa14.06□□□□□ -0.16
PKP4-213ENST00000486254 KLRG2A4D1S0 409 aaPredicted RBP14.06□□□□□ -0.16
PKP4-213ENST00000486254 HOXA10P31260 410 aaPredicted RBP14.06□□□□□ -0.16
PKP4-213ENST00000486254 HIBADHP31937 336 aaKnown RBP14.06□□□□□ -0.16
PKP4-213ENST00000486254 LIFRP42702 1097 aa14.06□□□□□ -0.16
PKP4-213ENST00000486254 HAND2P61296 217 aa14.06□□□□□ -0.16
PKP4-213ENST00000486254 PRR5LQ6MZQ0 368 aa14.06□□□□□ -0.16
PKP4-213ENST00000486254 BRIP1Q9BX63 1249 aa14.06□□□□□ -0.16
PKP4-213ENST00000486254 XDHP47989 1333 aa14.06□□□□□ -0.16
PKP4-213ENST00000486254 SH2B2O14492 632 aaPredicted RBP14.05□□□□□ -0.16
PKP4-213ENST00000486254 LETM1O95202 739 aaPredicted RBP14.05□□□□□ -0.16
PKP4-213ENST00000486254 CTDNEP1O95476 244 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 GYG1P46976 350 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 ST5P78524 1137 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 STK3Q13188 491 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 FAM184AQ8NB25 1140 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 LRRC2Q9BYS8 371 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 TMEM63CQ9P1W3 806 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 LTBP1Q14766 1721 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 JAK2O60674 1132 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 APPP05067 770 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 CYP7A1P22680 504 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 RESTQ13127 1097 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 SPTY2D1Q68D10 685 aaPredicted RBP14.05□□□□□ -0.16
PKP4-213ENST00000486254 CERS3Q8IU89 383 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 LCORLQ8N3X6 602 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 RIOK1Q9BRS2 568 aaKnown RBP14.05□□□□□ -0.16
PKP4-213ENST00000486254 ARMT1Q9H993 441 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 HPS5Q9UPZ3 1129 aa14.05□□□□□ -0.16
PKP4-213ENST00000486254 LAMB1P07942 1786 aa14.04□□□□□ -0.16
PKP4-213ENST00000486254 NPHP1O15259 732 aa14.04□□□□□ -0.16
PKP4-213ENST00000486254 CDKL5O76039 1030 aa14.04□□□□□ -0.16
PKP4-213ENST00000486254 DNM1Q05193 864 aaKnown RBP14.04□□□□□ -0.16
PKP4-213ENST00000486254 LRSAM1Q6UWE0 723 aa14.04□□□□□ -0.16
PKP4-213ENST00000486254 GAS2L3Q86XJ1 694 aa14.04□□□□□ -0.16
PKP4-213ENST00000486254 FLAD1Q8NFF5 587 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms