RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 OGFOD1Q8N543 542 aa10.9□□□□□ -0.66
XRN1-212ENST00000486211 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
XRN1-212ENST00000486211 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
XRN1-212ENST00000486211 SEC31BQ9NQW1 1179 aa10.9□□□□□ -0.66
XRN1-212ENST00000486211 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
XRN1-212ENST00000486211 MYO3BQ8WXR4 1341 aa10.89□□□□□ -0.67
XRN1-212ENST00000486211 PPP1R12BO60237 982 aaPredicted RBP10.89□□□□□ -0.67
XRN1-212ENST00000486211 GJB1P08034 283 aa10.89□□□□□ -0.67
XRN1-212ENST00000486211 U2AF1L5P0DN76 240 aaPredicted RBP10.89□□□□□ -0.67
XRN1-212ENST00000486211 LACTBP83111 547 aaPredicted RBP10.89□□□□□ -0.67
XRN1-212ENST00000486211 U2AF1Q01081 240 aaKnown RBP eCLIP10.89□□□□□ -0.67
XRN1-212ENST00000486211 AIMP1Q12904 312 aaKnown RBP10.89□□□□□ -0.67
XRN1-212ENST00000486211 DSG2Q14126 1118 aa10.89□□□□□ -0.67
XRN1-212ENST00000486211 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
XRN1-212ENST00000486211 GDF15Q99988 308 aa10.89□□□□□ -0.67
XRN1-212ENST00000486211 ISCA1Q9BUE6 129 aa10.89□□□□□ -0.67
XRN1-212ENST00000486211 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
XRN1-212ENST00000486211 XDHP47989 1333 aa10.88□□□□□ -0.67
XRN1-212ENST00000486211 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
XRN1-212ENST00000486211 EIF2S2P20042 333 aaKnown RBP10.88□□□□□ -0.67
XRN1-212ENST00000486211 BMP8BP34820 402 aa10.88□□□□□ -0.67
XRN1-212ENST00000486211 MMP14P50281 582 aa10.88□□□□□ -0.67
XRN1-212ENST00000486211 STRIP1Q5VSL9 837 aa10.88□□□□□ -0.67
XRN1-212ENST00000486211 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
XRN1-212ENST00000486211 MED23Q9ULK4 1368 aa10.88□□□□□ -0.67
XRN1-212ENST00000486211 IRS4O14654 1257 aaPredicted RBP10.87□□□□□ -0.67
XRN1-212ENST00000486211 FARP2O94887 1054 aaPredicted RBP10.87□□□□□ -0.67
XRN1-212ENST00000486211 GNRH1P01148 92 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 CCL5P13501 91 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 CTGFP29279 349 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 PRMT2P55345 433 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 ADGRD1Q6QNK2 874 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 ANKRD13AQ8IZ07 590 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 OPTNQ96CV9 577 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 PPP2R3BQ9Y5P8 575 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 ALPK3Q96L96 1907 aa10.87□□□□□ -0.67
XRN1-212ENST00000486211 ZNF804BA4D1E1 1349 aa10.86□□□□□ -0.67
XRN1-212ENST00000486211 EVI5O60447 810 aa10.86□□□□□ -0.67
XRN1-212ENST00000486211 TLR2O60603 784 aa10.86□□□□□ -0.67
XRN1-212ENST00000486211 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
XRN1-212ENST00000486211 IREB2P48200 963 aaKnown RBP10.86□□□□□ -0.67
XRN1-212ENST00000486211 RTL5Q5HYW3 569 aaPredicted RBP10.86□□□□□ -0.67
XRN1-212ENST00000486211 NBPF12Q5TAG4 269 aaPredicted RBP10.86□□□□□ -0.67
XRN1-212ENST00000486211 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
XRN1-212ENST00000486211 NUDCQ9Y266 331 aa10.86□□□□□ -0.67
XRN1-212ENST00000486211 ECM29Q5VYK3 1845 aa10.86□□□□□ -0.67
XRN1-212ENST00000486211 CCL15-CCL14A0A0B4J2E2 113 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 BCAMP50895 628 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 CCL15Q16663 113 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 PPP4R3BQ5MIZ7 849 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 KIAA0825Q8IV33 1275 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 U2AF1L4Q8WU68 220 aaKnown RBP10.85□□□□□ -0.67
XRN1-212ENST00000486211 CFAP53Q96M91 514 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 SRRDQ9UH36 339 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 PCDHAC2Q9Y5I4 1007 aa10.85□□□□□ -0.67
XRN1-212ENST00000486211 AOX1Q06278 1338 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 COL9A1P20849 921 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 GRK4P32298 578 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 TRIM28Q13263 835 aaKnown RBP10.84□□□□□ -0.67
XRN1-212ENST00000486211 KIF22Q14807 665 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.84□□□□□ -0.67
XRN1-212ENST00000486211 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 MTMR14Q8NCE2 650 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 PLBD2Q8NHP8 589 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 FBXW7Q969H0 707 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 RNF208Q9H0X6 261 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 RIPOR2Q9Y4F9 1068 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
XRN1-212ENST00000486211 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
XRN1-212ENST00000486211 GTF2A2P52657 109 aa10.83□□□□□ -0.68
XRN1-212ENST00000486211 GUCD1Q96NT3 240 aa10.83□□□□□ -0.68
XRN1-212ENST00000486211 COA1Q9GZY4 146 aa10.83□□□□□ -0.68
XRN1-212ENST00000486211 TSPYL4Q9UJ04 414 aa10.83□□□□□ -0.68
XRN1-212ENST00000486211 CLRN2A0PK11 232 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 TK2O00142 265 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 SGPL1O95470 568 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 OSBPP22059 807 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 PSEN2P49810 448 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
XRN1-212ENST00000486211 DLGAP5Q15398 846 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 TTLL5Q6EMB2 1281 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 C17orf99Q6UX52 265 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 ZBTB38Q8NAP3 1195 aaPredicted RBP10.82□□□□□ -0.68
XRN1-212ENST00000486211 UNC93B1Q9H1C4 597 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 ZCCHC17Q9NP64 241 aaKnown RBP10.82□□□□□ -0.68
XRN1-212ENST00000486211 HCSTQ9UBK5 93 aa10.82□□□□□ -0.68
XRN1-212ENST00000486211 BTBD19C9JJ37 291 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 PSMC4P43686 418 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 VGLL4Q14135 290 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 RASA3Q14644 834 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 CCDC152Q4G0S7 254 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 ANKRD18AQ8IVF6 992 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 TDHQ8IZJ6 230 aa10.81□□□□□ -0.68
XRN1-212ENST00000486211 CERS5Q8N5B7 392 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms