RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 NLRP3Q96P20 1036 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 USP44Q9H0E7 712 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 PRDM9Q9NQV7 894 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 DDX19BQ9UMR2 479 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 LRRFIP2Q9Y608 721 aaKnown RBP7.05□□□□□ -1.28
COPS3-208ENST00000486032 PDE8AO60658 829 aa7.04□□□□□ -1.28
COPS3-208ENST00000486032 ALDH1A1P00352 501 aa7.04□□□□□ -1.28
COPS3-208ENST00000486032 EPHA10Q5JZY3 1008 aa7.04□□□□□ -1.28
COPS3-208ENST00000486032 OLFM4Q6UX06 510 aa7.04□□□□□ -1.28
COPS3-208ENST00000486032 KRTAP1-3Q8IUG1 177 aa7.04□□□□□ -1.28
COPS3-208ENST00000486032 RPGRQ92834 1020 aaKnown RBP7.04□□□□□ -1.28
COPS3-208ENST00000486032 TAF1P21675 1872 aa7.04□□□□□ -1.28
COPS3-208ENST00000486032 DDX60Q8IY21 1712 aaKnown RBP7.04□□□□□ -1.28
COPS3-208ENST00000486032 RNF123Q5XPI4 1314 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 CDHR2Q9BYE9 1310 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 H0YIN7 160 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 ZBTB7BO15156 539 aaPredicted RBP7.03□□□□□ -1.28
COPS3-208ENST00000486032 GNAI2P04899 355 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 HSP90B1P14625 803 aaKnown RBP7.03□□□□□ -1.28
COPS3-208ENST00000486032 PDE6BP35913 854 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 CASP7P55210 303 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 TAF7LQ5H9L4 462 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 MORN1Q5T089 497 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 LMBR1LQ6UX01 489 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 ZFP42Q96MM3 310 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 BRIP1Q9BX63 1249 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 BCL11AQ9H165 835 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 BICC1Q9H694 974 aaKnown RBP7.03□□□□□ -1.28
COPS3-208ENST00000486032 CD2APQ9Y5K6 639 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 ADGRG1Q9Y653 693 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 SLX4Q8IY92 1834 aa7.03□□□□□ -1.28
COPS3-208ENST00000486032 ADAM23O75077 832 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 CTSWP56202 376 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 FOXO4P98177 505 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 GPR162Q16538 588 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 FAM161AQ3B820 660 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 CCDC152Q4G0S7 254 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 SLC10A5Q5PT55 438 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 DDX46Q7L014 1031 aaKnown RBP7.02□□□□□ -1.29
COPS3-208ENST00000486032 RBM17Q96I25 401 aaKnown RBP7.02□□□□□ -1.29
COPS3-208ENST00000486032 KAZALD1Q96I82 304 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 ZNF594Q96JF6 807 aaPredicted RBP7.02□□□□□ -1.29
COPS3-208ENST00000486032 CHMP4BQ9H444 224 aaKnown RBP7.02□□□□□ -1.29
COPS3-208ENST00000486032 GREM2Q9H772 168 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 SEC31BQ9NQW1 1179 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 HDAC5Q9UQL6 1122 aa7.02□□□□□ -1.29
COPS3-208ENST00000486032 ARIH1Q9Y4X5 557 aaPredicted RBP7.02□□□□□ -1.29
COPS3-208ENST00000486032 IBTKQ9P2D0 1353 aaPredicted RBP7.02□□□□□ -1.29
COPS3-208ENST00000486032 UTYO14607 1347 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 ARFGEF1Q9Y6D6 1849 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 COL4A5P29400 1685 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 ANKRD18BA2A2Z9 1011 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 SRGAP3O43295 1099 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 ITGA6P23229 1130 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 IFIT5Q13325 482 aaKnown RBP7.01□□□□□ -1.29
COPS3-208ENST00000486032 CCDC57Q2TAC2 916 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 ANKRD44Q8N8A2 993 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 TTLL11Q8NHH1 800 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 KLHDC4Q8TBB5 520 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 MASTLQ96GX5 879 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 ZBTB40Q9NUA8 1239 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 BCS1LQ9Y276 419 aa7.01□□□□□ -1.29
COPS3-208ENST00000486032 PNMA6EA0A0J9YXQ4 647 aa7□□□□□ -1.29
COPS3-208ENST00000486032 APBB1O00213 710 aa7□□□□□ -1.29
COPS3-208ENST00000486032 SRGNP10124 158 aa7□□□□□ -1.29
COPS3-208ENST00000486032 NPR1P16066 1061 aa7□□□□□ -1.29
COPS3-208ENST00000486032 FECHP22830 423 aa7□□□□□ -1.29
COPS3-208ENST00000486032 IGHMBP2P38935 993 aaKnown RBP7□□□□□ -1.29
COPS3-208ENST00000486032 OS9Q13438 667 aaPredicted RBP7□□□□□ -1.29
COPS3-208ENST00000486032 SF3B3Q15393 1217 aaKnown RBP7□□□□□ -1.29
COPS3-208ENST00000486032 MSS51Q4VC12 460 aa7□□□□□ -1.29
COPS3-208ENST00000486032 CEP85Q6P2H3 762 aa7□□□□□ -1.29
COPS3-208ENST00000486032 ANKRD18AQ8IVF6 992 aa7□□□□□ -1.29
COPS3-208ENST00000486032 CELF1Q92879 486 aaKnown RBP7□□□□□ -1.29
COPS3-208ENST00000486032 MPHOSPH8Q99549 860 aa7□□□□□ -1.29
COPS3-208ENST00000486032 PLA2G12BQ9BX93 195 aa7□□□□□ -1.29
COPS3-208ENST00000486032 SIL1Q9H173 461 aa7□□□□□ -1.29
COPS3-208ENST00000486032 PA2G4Q9UQ80 394 aaKnown RBP7□□□□□ -1.29
COPS3-208ENST00000486032 SNED1Q8TER0 1413 aa7□□□□□ -1.29
COPS3-208ENST00000486032 MYH3P11055 1940 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 NFKBIEO00221 500 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 C21orf2O43822 256 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 CSF1RP07333 972 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 ALDH1B1P30837 517 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 IRS1P35568 1242 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 TGFB2P61812 414 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 ATP8B2P98198 1209 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 GRAPQ13588 217 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 STYK1Q6J9G0 422 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 TTLL6Q8N841 843 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 GRAPLQ8TC17 118 aaPredicted RBP6.99□□□□□ -1.29
COPS3-208ENST00000486032 CNKSR1Q969H4 720 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 CDC5LQ99459 802 aaKnown RBP6.99□□□□□ -1.29
COPS3-208ENST00000486032 PUS3Q9BZE2 481 aaKnown RBP6.99□□□□□ -1.29
COPS3-208ENST00000486032 TMX4Q9H1E5 349 aaPredicted RBP6.99□□□□□ -1.29
COPS3-208ENST00000486032 CNNM1Q9NRU3 951 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 PIM2Q9P1W9 311 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 PCDHB15Q9Y5E8 787 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 CHD4Q14839 1912 aa6.99□□□□□ -1.29
COPS3-208ENST00000486032 TIAM2Q8IVF5 1701 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms