RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 H3BRB1 525 aa8.17□□□□□ -1.1
GCFC2-209ENST00000486016 MAP4P27816 1152 aaKnown RBP8.17□□□□□ -1.1
GCFC2-209ENST00000486016 EXOSC6Q5RKV6 272 aaKnown RBP8.17□□□□□ -1.1
GCFC2-209ENST00000486016 NUTM2GQ5VZR2 741 aa8.17□□□□□ -1.1
GCFC2-209ENST00000486016 B4GALNT3Q6L9W6 998 aa8.17□□□□□ -1.1
GCFC2-209ENST00000486016 C12orf50Q8NA57 414 aaPredicted RBP8.17□□□□□ -1.1
GCFC2-209ENST00000486016 CLEC4MQ9H2X3 399 aaPredicted RBP8.17□□□□□ -1.1
GCFC2-209ENST00000486016 KCNF1Q9H3M0 494 aa8.17□□□□□ -1.1
GCFC2-209ENST00000486016 TUT1Q9H6E5 874 aaKnown RBP8.17□□□□□ -1.1
GCFC2-209ENST00000486016 BRPF3Q9ULD4 1205 aa8.17□□□□□ -1.1
GCFC2-209ENST00000486016 DRD2P14416 443 aa8.16□□□□□ -1.1
GCFC2-209ENST00000486016 PCDH1Q08174 1060 aa8.16□□□□□ -1.1
GCFC2-209ENST00000486016 C2CD4AQ8NCU7 369 aaPredicted RBP8.16□□□□□ -1.1
GCFC2-209ENST00000486016 LIN7BQ9HAP6 207 aa8.16□□□□□ -1.1
GCFC2-209ENST00000486016 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
GCFC2-209ENST00000486016 CTSBP07858 339 aa8.15□□□□□ -1.1
GCFC2-209ENST00000486016 GSTM4Q03013 218 aa8.15□□□□□ -1.1
GCFC2-209ENST00000486016 ORC1Q13415 861 aa8.15□□□□□ -1.1
GCFC2-209ENST00000486016 GLYCTKQ8IVS8 523 aa8.15□□□□□ -1.1
GCFC2-209ENST00000486016 KRTAP4-2Q9BYR5 136 aa8.15□□□□□ -1.1
GCFC2-209ENST00000486016 GAS2O43903 313 aaKnown RBP8.14□□□□□ -1.11
GCFC2-209ENST00000486016 ITPKAP23677 461 aa8.14□□□□□ -1.11
GCFC2-209ENST00000486016 OGFOD2Q6N063 350 aa8.14□□□□□ -1.11
GCFC2-209ENST00000486016 CDPF1Q6NVV7 123 aa8.14□□□□□ -1.11
GCFC2-209ENST00000486016 SHISA5Q8N114 240 aa8.14□□□□□ -1.11
GCFC2-209ENST00000486016 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
GCFC2-209ENST00000486016 TRIM56Q9BRZ2 755 aaKnown RBP8.14□□□□□ -1.11
GCFC2-209ENST00000486016 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
GCFC2-209ENST00000486016 B3GALT4O96024 378 aa8.13□□□□□ -1.11
GCFC2-209ENST00000486016 F13BP05160 661 aa8.13□□□□□ -1.11
GCFC2-209ENST00000486016 SOX4Q06945 474 aaPredicted RBP8.13□□□□□ -1.11
GCFC2-209ENST00000486016 EZH1Q92800 747 aaPredicted RBP8.13□□□□□ -1.11
GCFC2-209ENST00000486016 MFSD14AQ96MC6 490 aa8.13□□□□□ -1.11
GCFC2-209ENST00000486016 WDR64B1ANS9 1081 aa8.12□□□□□ -1.11
GCFC2-209ENST00000486016 GPR182O15218 404 aa8.12□□□□□ -1.11
GCFC2-209ENST00000486016 MAOBP27338 520 aa8.12□□□□□ -1.11
GCFC2-209ENST00000486016 HOXA10P31260 410 aaPredicted RBP8.12□□□□□ -1.11
GCFC2-209ENST00000486016 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
GCFC2-209ENST00000486016 ZNF576Q9H609 170 aa8.12□□□□□ -1.11
GCFC2-209ENST00000486016 NDUFB5O43674 189 aa8.11□□□□□ -1.11
GCFC2-209ENST00000486016 CPNE3O75131 537 aaKnown RBP8.11□□□□□ -1.11
GCFC2-209ENST00000486016 NEFLP07196 543 aa8.11□□□□□ -1.11
GCFC2-209ENST00000486016 ABI1Q8IZP0 508 aa8.11□□□□□ -1.11
GCFC2-209ENST00000486016 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
GCFC2-209ENST00000486016 FBLIM1Q8WUP2 373 aa8.11□□□□□ -1.11
GCFC2-209ENST00000486016 GATA6Q92908 595 aa8.11□□□□□ -1.11
GCFC2-209ENST00000486016 FAM95CA0A1B0GW59 222 aa8.1□□□□□ -1.11
GCFC2-209ENST00000486016 ECEL1O95672 775 aa8.1□□□□□ -1.11
GCFC2-209ENST00000486016 ADH5P11766 374 aa8.1□□□□□ -1.11
GCFC2-209ENST00000486016 ADMP35318 185 aa8.1□□□□□ -1.11
GCFC2-209ENST00000486016 GSX1Q9H4S2 264 aaPredicted RBP8.1□□□□□ -1.11
GCFC2-209ENST00000486016 ABCB6Q9NP58 842 aa8.1□□□□□ -1.11
GCFC2-209ENST00000486016 NPHS2Q9NP85 383 aa8.1□□□□□ -1.11
GCFC2-209ENST00000486016 PIM2Q9P1W9 311 aa8.1□□□□□ -1.11
GCFC2-209ENST00000486016 EIF1AYO14602 144 aaKnown RBP8.09□□□□□ -1.11
GCFC2-209ENST00000486016 CYP11A1P05108 521 aa8.09□□□□□ -1.11
GCFC2-209ENST00000486016 C8AP07357 584 aa8.09□□□□□ -1.11
GCFC2-209ENST00000486016 PTPN12Q05209 780 aaKnown RBP8.09□□□□□ -1.11
GCFC2-209ENST00000486016 POU4F3Q15319 338 aa8.09□□□□□ -1.11
GCFC2-209ENST00000486016 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
GCFC2-209ENST00000486016 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
GCFC2-209ENST00000486016 CCDC74AQ96AQ1 378 aa8.09□□□□□ -1.11
GCFC2-209ENST00000486016 DNAJC25Q9H1X3 360 aa8.09□□□□□ -1.11
GCFC2-209ENST00000486016 MSMPQ1L6U9 139 aa8.08□□□□□ -1.12
GCFC2-209ENST00000486016 RBCK1Q9BYM8 510 aa8.08□□□□□ -1.12
GCFC2-209ENST00000486016 PRKAG2Q9UGJ0 569 aa8.08□□□□□ -1.12
GCFC2-209ENST00000486016 ACTL7BQ9Y614 415 aa8.08□□□□□ -1.12
GCFC2-209ENST00000486016 FOSL1P15407 271 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 RXRBP28702 533 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 USP11P51784 963 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 CPSF6Q16630 551 aaKnown RBP eCLIP8.07□□□□□ -1.12
GCFC2-209ENST00000486016 PAOXQ6QHF9 649 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 NFXL1Q6ZNB6 911 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 FBXL6Q8N531 539 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 POU5F2Q8N7G0 328 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 ALKBH8Q96BT7 664 aaKnown RBP8.07□□□□□ -1.12
GCFC2-209ENST00000486016 NIF3L1Q9GZT8 377 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 EHD4Q9H223 541 aa8.07□□□□□ -1.12
GCFC2-209ENST00000486016 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
GCFC2-209ENST00000486016 ZAR1Q86SH2 424 aa8.06□□□□□ -1.12
GCFC2-209ENST00000486016 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
GCFC2-209ENST00000486016 SYNGAP1Q96PV0 1343 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 TMEM238LA0A1B0GVL6 79 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 FAAP100Q0VG06 881 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
GCFC2-209ENST00000486016 SEZ6L2Q6UXD5 910 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 ASIC4Q96FT7 647 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 CSRNP1Q96S65 589 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 ARID3AQ99856 593 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 ATG3Q9NT62 314 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 FAM105AQ9NUU6 356 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 ANGEL1Q9UNK9 670 aaKnown RBP8.05□□□□□ -1.12
GCFC2-209ENST00000486016 LEMD3Q9Y2U8 911 aa8.05□□□□□ -1.12
GCFC2-209ENST00000486016 SOWAHDA6NJG2 315 aa8.04□□□□□ -1.12
GCFC2-209ENST00000486016 SUPT5HO00267 1087 aaKnown RBP8.04□□□□□ -1.12
GCFC2-209ENST00000486016 NFICP08651 508 aa8.04□□□□□ -1.12
GCFC2-209ENST00000486016 GRM2Q14416 872 aa8.04□□□□□ -1.12
GCFC2-209ENST00000486016 SEMA6CQ9H3T2 930 aa8.04□□□□□ -1.12
GCFC2-209ENST00000486016 ZFYVE1Q9HBF4 777 aa8.04□□□□□ -1.12
GCFC2-209ENST00000486016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms