RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 MPNDQ8N594 471 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 MAGEB6Q8N7X4 407 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 PALD1Q9ULE6 856 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 BCS1LQ9Y276 419 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 SNX14Q9Y5W7 946 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 G3V3G9 751 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 K7ELQ4 463 aaPredicted RBP11.38□□□□□ -0.59
CTSA-208ENST00000485627 SLC27A2O14975 620 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 HSPD1P10809 573 aaKnown RBP11.38□□□□□ -0.59
CTSA-208ENST00000485627 NECTIN1Q15223 517 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 SLFNL1Q499Z3 407 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 JMYQ8N9B5 988 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 TBC1D16Q8TBP0 767 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 WDR66Q8TBY9 1149 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 EYA3Q99504 573 aa11.38□□□□□ -0.59
CTSA-208ENST00000485627 PUS7LQ9H0K6 701 aaKnown RBP11.38□□□□□ -0.59
CTSA-208ENST00000485627 GPAA1O43292 621 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 IGSF3O75054 1194 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 APPP05067 770 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 CYP7A1P22680 504 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 NAA16Q6N069 864 aaPredicted RBP11.37□□□□□ -0.59
CTSA-208ENST00000485627 TMED8Q6PL24 325 aaPredicted RBP11.37□□□□□ -0.59
CTSA-208ENST00000485627 TXNRD3Q86VQ6 643 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 KCNB2Q92953 911 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 JAKMIP1Q96N16 626 aaKnown RBP11.37□□□□□ -0.59
CTSA-208ENST00000485627 ZC3H12CQ9C0D7 883 aaKnown RBP11.37□□□□□ -0.59
CTSA-208ENST00000485627 POLLQ9UGP5 575 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 AKAP11Q9UKA4 1901 aa11.37□□□□□ -0.59
CTSA-208ENST00000485627 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 PCNTO95613 3336 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 GNAT2P19087 354 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 CASTP20810 708 aaKnown RBP11.36□□□□□ -0.59
CTSA-208ENST00000485627 CHRNA5P30532 468 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 IMMTQ16891 758 aaKnown RBP11.36□□□□□ -0.59
CTSA-208ENST00000485627 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 TDRD7Q8NHU6 1098 aaKnown RBP11.36□□□□□ -0.59
CTSA-208ENST00000485627 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
CTSA-208ENST00000485627 UPF3BQ9BZI7 483 aaKnown RBP11.36□□□□□ -0.59
CTSA-208ENST00000485627 TM6SF1Q9BZW5 370 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 CYP46A1Q9Y6A2 500 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
CTSA-208ENST00000485627 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 KIAA1551Q9HCM1 1747 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 MBD4O95243 580 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 DPEP1P16444 411 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 C9orf131Q5VYM1 1079 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 BLOC1S2Q6QNY1 142 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 DZIP1Q86YF9 867 aaKnown RBP11.35□□□□□ -0.59
CTSA-208ENST00000485627 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
CTSA-208ENST00000485627 NACAP1Q9BZK3 213 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 COA1Q9GZY4 146 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 CD209Q9NNX6 404 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 C10orf71Q711Q0 1435 aa11.35□□□□□ -0.59
CTSA-208ENST00000485627 MAGEB6P1A0A0J9YX57 407 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
CTSA-208ENST00000485627 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
CTSA-208ENST00000485627 IL1R1P14778 569 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 GSTO1P78417 241 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 TSGA10IPQ3SY00 556 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 VPS53Q5VIR6 699 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 SLC51AQ86UW1 340 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 TTLL6Q8N841 843 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 STRBPQ96SI9 672 aaKnown RBP11.34□□□□□ -0.59
CTSA-208ENST00000485627 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
CTSA-208ENST00000485627 RRAGCQ9HB90 399 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 PDRG1Q9NUG6 133 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
CTSA-208ENST00000485627 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
CTSA-208ENST00000485627 ZNF213O14771 459 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 CD2BP2O95400 341 aaKnown RBP11.33□□□□□ -0.6
CTSA-208ENST00000485627 FGAP02671 866 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 LDHCP07864 332 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 HMGB1P09429 215 aaKnown RBP11.33□□□□□ -0.6
CTSA-208ENST00000485627 HSPA1AP0DMV8 641 aaKnown RBP11.33□□□□□ -0.6
CTSA-208ENST00000485627 HSPA1BP0DMV9 641 aaKnown RBP11.33□□□□□ -0.6
CTSA-208ENST00000485627 MECOMQ03112 1051 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 RUFY3Q7L099 469 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 FBXW7Q969H0 707 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.6
CTSA-208ENST00000485627 ARMT1Q9H993 441 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 JAG2Q9Y219 1238 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 SLC4A4Q9Y6R1 1079 aa11.33□□□□□ -0.6
CTSA-208ENST00000485627 RPAP1Q9BWH6 1393 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms