RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 INHBEP58166 350 aa24.17■■□□□ 1.46
COL27A1-205ENST00000485397 TNFAIP1Q13829 316 aa24.17■■□□□ 1.46
COL27A1-205ENST00000485397 CDAN1Q8IWY9 1227 aa24.17■■□□□ 1.46
COL27A1-205ENST00000485397 CDCA7LQ96GN5 454 aa24.17■■□□□ 1.46
COL27A1-205ENST00000485397 TCP10L2B9ZVM9 353 aa24.16■■□□□ 1.46
COL27A1-205ENST00000485397 IGF2BP3O00425 579 aaKnown RBP eCLIP24.16■■□□□ 1.46
COL27A1-205ENST00000485397 CAVIN4Q5BKX8 364 aa24.16■■□□□ 1.46
COL27A1-205ENST00000485397 FRAT2O75474 233 aaPredicted RBP24.15■■□□□ 1.46
COL27A1-205ENST00000485397 BCAMP50895 628 aa24.15■■□□□ 1.46
COL27A1-205ENST00000485397 ANKRD13AQ8IZ07 590 aa24.15■■□□□ 1.46
COL27A1-205ENST00000485397 TEPSINQ96N21 525 aa24.15■■□□□ 1.46
COL27A1-205ENST00000485397 TMEM39BQ9GZU3 492 aa24.14■■□□□ 1.45
COL27A1-205ENST00000485397 RFX5P48382 616 aaPredicted RBP24.13■■□□□ 1.45
COL27A1-205ENST00000485397 FBXO46Q6PJ61 603 aaPredicted RBP24.13■■□□□ 1.45
COL27A1-205ENST00000485397 TBC1D22AQ8WUA7 517 aa24.13■■□□□ 1.45
COL27A1-205ENST00000485397 ELP3Q9H9T3 547 aa24.13■■□□□ 1.45
COL27A1-205ENST00000485397 ARAP2Q8WZ64 1704 aa24.13■■□□□ 1.45
COL27A1-205ENST00000485397 FGFR2P21802 821 aa24.12■■□□□ 1.45
COL27A1-205ENST00000485397 ALDH1L2Q3SY69 923 aa24.12■■□□□ 1.45
COL27A1-205ENST00000485397 SMC4Q9NTJ3 1288 aa24.12■■□□□ 1.45
COL27A1-205ENST00000485397 CACNB3P54284 484 aa24.11■■□□□ 1.45
COL27A1-205ENST00000485397 HDLBPQ00341 1268 aaKnown RBP24.11■■□□□ 1.45
COL27A1-205ENST00000485397 EYA2O00167 538 aa24.1■■□□□ 1.45
COL27A1-205ENST00000485397 IFIT1P09914 478 aaKnown RBP24.1■■□□□ 1.45
COL27A1-205ENST00000485397 TNNI2P48788 182 aa24.1■■□□□ 1.45
COL27A1-205ENST00000485397 PUM3Q15397 648 aaKnown RBP24.1■■□□□ 1.45
COL27A1-205ENST00000485397 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.1■■□□□ 1.45
COL27A1-205ENST00000485397 TEKT1Q969V4 418 aa24.1■■□□□ 1.45
COL27A1-205ENST00000485397 OPTNQ96CV9 577 aa24.1■■□□□ 1.45
COL27A1-205ENST00000485397 PTPN18Q99952 460 aa24.1■■□□□ 1.45
COL27A1-205ENST00000485397 TRMT2AQ8IZ69 625 aaKnown RBP24.09■■□□□ 1.45
COL27A1-205ENST00000485397 CNKSR2Q8WXI2 1034 aa24.09■■□□□ 1.45
COL27A1-205ENST00000485397 TESPA1A2RU30 521 aaPredicted RBP24.08■■□□□ 1.45
COL27A1-205ENST00000485397 MAP3K9P80192 1104 aa24.08■■□□□ 1.45
COL27A1-205ENST00000485397 CRHR2Q13324 411 aa24.08■■□□□ 1.45
COL27A1-205ENST00000485397 KIF16BQ96L93 1317 aa24.08■■□□□ 1.44
COL27A1-205ENST00000485397 OTUD7BQ6GQQ9 843 aa24.07■■□□□ 1.44
COL27A1-205ENST00000485397 APOBEC3HQ6NTF7 200 aaKnown RBP24.07■■□□□ 1.44
COL27A1-205ENST00000485397 ATG9AQ7Z3C6 839 aa24.07■■□□□ 1.44
COL27A1-205ENST00000485397 ZDHHC15Q96MV8 337 aa24.07■■□□□ 1.44
COL27A1-205ENST00000485397 MRIQ9BWK5 157 aa24.07■■□□□ 1.44
COL27A1-205ENST00000485397 TRIM17Q9Y577 477 aa24.07■■□□□ 1.44
COL27A1-205ENST00000485397 OTOFQ9HC10 1997 aa24.07■■□□□ 1.44
COL27A1-205ENST00000485397 SLC5A1P13866 664 aa24.06■■□□□ 1.44
COL27A1-205ENST00000485397 VGLL4Q14135 290 aa24.06■■□□□ 1.44
COL27A1-205ENST00000485397 OTOP1Q7RTM1 612 aa24.06■■□□□ 1.44
COL27A1-205ENST00000485397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.06■■□□□ 1.44
COL27A1-205ENST00000485397 LPIN2Q92539 896 aa24.06■■□□□ 1.44
COL27A1-205ENST00000485397 MS4A4AQ96JQ5 239 aa24.06■■□□□ 1.44
COL27A1-205ENST00000485397 NOB1Q9ULX3 412 aaKnown RBP24.06■■□□□ 1.44
COL27A1-205ENST00000485397 UBTFL1P0CB47 393 aaPredicted RBP24.05■■□□□ 1.44
COL27A1-205ENST00000485397 SUGT1Q9Y2Z0 365 aa24.05■■□□□ 1.44
COL27A1-205ENST00000485397 LAMB1P07942 1786 aa24.05■■□□□ 1.44
COL27A1-205ENST00000485397 CD99L2Q8TCZ2 262 aa24.04■■□□□ 1.44
COL27A1-205ENST00000485397 BRI3BPQ8WY22 251 aa24.04■■□□□ 1.44
COL27A1-205ENST00000485397 SIL1Q9H173 461 aa24.04■■□□□ 1.44
COL27A1-205ENST00000485397 TMOD2Q9NZR1 351 aa24.04■■□□□ 1.44
COL27A1-205ENST00000485397 HHIPL2Q6UWX4 724 aa24.03■■□□□ 1.44
COL27A1-205ENST00000485397 ERO1AQ96HE7 468 aa24.03■■□□□ 1.44
COL27A1-205ENST00000485397 CSADQ9Y600 493 aa24.03■■□□□ 1.44
COL27A1-205ENST00000485397 MAST3O60307 1309 aa24.03■■□□□ 1.44
COL27A1-205ENST00000485397 CCL15-CCL14A0A0B4J2E2 113 aa24.02■■□□□ 1.44
COL27A1-205ENST00000485397 SLC34A2O95436 690 aa24.02■■□□□ 1.44
COL27A1-205ENST00000485397 CCL15Q16663 113 aa24.02■■□□□ 1.44
COL27A1-205ENST00000485397 FAM83AQ86UY5 434 aa24.02■■□□□ 1.44
COL27A1-205ENST00000485397 WDR66Q8TBY9 1149 aa24.02■■□□□ 1.44
COL27A1-205ENST00000485397 OTUD5Q96G74 571 aa24.02■■□□□ 1.44
COL27A1-205ENST00000485397 PDE4DIPQ5VU43 2346 aa24.02■■□□□ 1.44
COL27A1-205ENST00000485397 CAP1Q01518 475 aa24.01■■□□□ 1.43
COL27A1-205ENST00000485397 FKBP1CQ5VVH2 108 aa24.01■■□□□ 1.43
COL27A1-205ENST00000485397 LRRFIP2Q9Y608 721 aaKnown RBP24.01■■□□□ 1.43
COL27A1-205ENST00000485397 CIAO1O76071 339 aa24■■□□□ 1.43
COL27A1-205ENST00000485397 CT47B1P0C2W7 299 aaPredicted RBP24■■□□□ 1.43
COL27A1-205ENST00000485397 GTF2A2P52657 109 aa24■■□□□ 1.43
COL27A1-205ENST00000485397 SP3Q02447 781 aa24■■□□□ 1.43
COL27A1-205ENST00000485397 ATP2B3Q16720 1220 aa24■■□□□ 1.43
COL27A1-205ENST00000485397 API5Q9BZZ5 524 aaKnown RBP24■■□□□ 1.43
COL27A1-205ENST00000485397 CEP126Q9P2H0 1117 aa24■■□□□ 1.43
COL27A1-205ENST00000485397 FBXO3Q9UK99 471 aa24■■□□□ 1.43
COL27A1-205ENST00000485397 PA2G4Q9UQ80 394 aaKnown RBP24■■□□□ 1.43
COL27A1-205ENST00000485397 SNCAIPQ9Y6H5 919 aa24■■□□□ 1.43
COL27A1-205ENST00000485397 SPDYE5A6NIY4 337 aa23.99■■□□□ 1.43
COL27A1-205ENST00000485397 ZKSCAN4Q969J2 545 aaPredicted RBP23.99■■□□□ 1.43
COL27A1-205ENST00000485397 WRNIP1Q96S55 665 aa23.99■■□□□ 1.43
COL27A1-205ENST00000485397 TAF1CQ15572 869 aaPredicted RBP23.98■■□□□ 1.43
COL27A1-205ENST00000485397 DIXDC1Q155Q3 683 aa23.98■■□□□ 1.43
COL27A1-205ENST00000485397 FAM43AQ8N2R8 423 aa23.98■■□□□ 1.43
COL27A1-205ENST00000485397 EFCC1Q9HA90 598 aa23.98■■□□□ 1.43
COL27A1-205ENST00000485397 PTPN22Q9Y2R2 807 aa23.98■■□□□ 1.43
COL27A1-205ENST00000485397 DAGLAQ9Y4D2 1042 aa23.98■■□□□ 1.43
COL27A1-205ENST00000485397 TNRC18O15417 2968 aaPredicted RBP23.97■■□□□ 1.43
COL27A1-205ENST00000485397 PRDX5P30044 214 aa23.97■■□□□ 1.43
COL27A1-205ENST00000485397 MIGA2Q7L4E1 593 aa23.97■■□□□ 1.43
COL27A1-205ENST00000485397 ERO1BQ86YB8 467 aa23.97■■□□□ 1.43
COL27A1-205ENST00000485397 MEIS3Q99687 375 aa23.97■■□□□ 1.43
COL27A1-205ENST00000485397 ZFYVE28Q9HCC9 887 aa23.97■■□□□ 1.43
COL27A1-205ENST00000485397 IL15P40933 162 aaPredicted RBP23.96■■□□□ 1.43
COL27A1-205ENST00000485397 PHKA1P46020 1223 aa23.96■■□□□ 1.43
COL27A1-205ENST00000485397 CDC42EP5Q6NZY7 148 aa23.96■■□□□ 1.43
COL27A1-205ENST00000485397 HOOK2Q96ED9 719 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms