RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 GGA1Q9UJY5 639 aa13.18□□□□□ -0.3
PEX1-208ENST00000484913 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
PEX1-208ENST00000484913 TJP1Q07157 1748 aa13.18□□□□□ -0.3
PEX1-208ENST00000484913 USP5P45974 858 aa13.18□□□□□ -0.3
PEX1-208ENST00000484913 UBE4AQ14139 1066 aa13.18□□□□□ -0.3
PEX1-208ENST00000484913 BTAF1O14981 1849 aa13.17□□□□□ -0.3
PEX1-208ENST00000484913 CHRNA5P30532 468 aa13.17□□□□□ -0.3
PEX1-208ENST00000484913 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
PEX1-208ENST00000484913 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
PEX1-208ENST00000484913 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
PEX1-208ENST00000484913 FGFR2P21802 821 aa13.17□□□□□ -0.3
PEX1-208ENST00000484913 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
PEX1-208ENST00000484913 GPSM2P81274 684 aa13.17□□□□□ -0.3
PEX1-208ENST00000484913 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
PEX1-208ENST00000484913 NCOA7Q8NI08 942 aa13.17□□□□□ -0.3
PEX1-208ENST00000484913 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
PEX1-208ENST00000484913 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
PEX1-208ENST00000484913 SMIM22K7EJ46 135 aa13.16□□□□□ -0.3
PEX1-208ENST00000484913 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
PEX1-208ENST00000484913 DSCC1Q9BVC3 393 aa13.16□□□□□ -0.3
PEX1-208ENST00000484913 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
PEX1-208ENST00000484913 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
PEX1-208ENST00000484913 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
PEX1-208ENST00000484913 STX6O43752 255 aa13.16□□□□□ -0.3
PEX1-208ENST00000484913 SYT1P21579 422 aa13.16□□□□□ -0.3
PEX1-208ENST00000484913 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
PEX1-208ENST00000484913 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
PEX1-208ENST00000484913 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
PEX1-208ENST00000484913 ARID4AP29374 1257 aaPredicted RBP13.15□□□□□ -0.3
PEX1-208ENST00000484913 GTF2IP78347 998 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 PICALMQ13492 652 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 LDHBP07195 334 aaKnown RBP13.15□□□□□ -0.3
PEX1-208ENST00000484913 ADRA2BP18089 450 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 TTC14Q96N46 770 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 ZC3H12CQ9C0D7 883 aaKnown RBP13.15□□□□□ -0.3
PEX1-208ENST00000484913 ERICH2A1L162 156 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 ADGRA1Q86SQ6 560 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
PEX1-208ENST00000484913 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
PEX1-208ENST00000484913 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.31
PEX1-208ENST00000484913 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
PEX1-208ENST00000484913 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 MCM5P33992 734 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 TBC1D10CQ8IV04 446 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 DBNDD1Q9H9R9 158 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
PEX1-208ENST00000484913 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
PEX1-208ENST00000484913 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 TOB2Q14106 344 aaPredicted RBP13.14□□□□□ -0.31
PEX1-208ENST00000484913 MXD3Q9BW11 206 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.14□□□□□ -0.31
PEX1-208ENST00000484913 SCNN1DP51172 638 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
PEX1-208ENST00000484913 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
PEX1-208ENST00000484913 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 XDHP47989 1333 aa13.14□□□□□ -0.31
PEX1-208ENST00000484913 MECOMQ03112 1051 aa13.13□□□□□ -0.31
PEX1-208ENST00000484913 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
PEX1-208ENST00000484913 CCDC69A6NI79 296 aa13.13□□□□□ -0.31
PEX1-208ENST00000484913 BAG6P46379 1132 aa13.13□□□□□ -0.31
PEX1-208ENST00000484913 UBE3CQ15386 1083 aa13.13□□□□□ -0.31
PEX1-208ENST00000484913 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
PEX1-208ENST00000484913 MFSD14BQ5SR56 506 aa13.13□□□□□ -0.31
PEX1-208ENST00000484913 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
PEX1-208ENST00000484913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
PEX1-208ENST00000484913 POLRMTO00411 1230 aaKnown RBP13.13□□□□□ -0.31
PEX1-208ENST00000484913 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
PEX1-208ENST00000484913 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 TM6SF1Q9BZW5 370 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 USP17L21D6R901 530 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 DNM1Q05193 864 aaKnown RBP13.12□□□□□ -0.31
PEX1-208ENST00000484913 CDC37L1Q7L3B6 337 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 MPNDQ8N594 471 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 WNK3Q9BYP7 1800 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 HMGB1P09429 215 aaKnown RBP13.12□□□□□ -0.31
PEX1-208ENST00000484913 CYP2D6P10635 497 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 ATP2B2Q01814 1243 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 FAM47AQ5JRC9 791 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
PEX1-208ENST00000484913 hCG_1642624A0A1W2PR95 340 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 H0YIN7 160 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
PEX1-208ENST00000484913 PTPDC1A2A3K4 754 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
PEX1-208ENST00000484913 EVX2Q03828 476 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 SCRN1Q12765 414 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
PEX1-208ENST00000484913 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 NEDD4P46934 1319 aa13.11□□□□□ -0.31
PEX1-208ENST00000484913 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms