RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 NPHS2Q9NP85 383 aa7.86□□□□□ -1.15
SMC4-215ENST00000484799 LOC100289279A0A1B0GTE1 492 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 MAOBP27338 520 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 MAPK1P28482 360 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 GRIA4P48058 902 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 ECM1Q16610 540 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.85□□□□□ -1.15
SMC4-215ENST00000484799 SMG8Q8ND04 991 aaKnown RBP7.85□□□□□ -1.15
SMC4-215ENST00000484799 CSRNP1Q96S65 589 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 DBNDD2Q9BQY9 259 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 DCTN4Q9UJW0 460 aa7.85□□□□□ -1.15
SMC4-215ENST00000484799 FAM95CA0A1B0GW59 222 aa7.84□□□□□ -1.15
SMC4-215ENST00000484799 TM4SF5O14894 197 aa7.84□□□□□ -1.15
SMC4-215ENST00000484799 INTS5Q6P9B9 1019 aaKnown RBP7.84□□□□□ -1.15
SMC4-215ENST00000484799 TCF12Q99081 682 aa7.84□□□□□ -1.15
SMC4-215ENST00000484799 TMPRSS13Q9BYE2 586 aa7.84□□□□□ -1.15
SMC4-215ENST00000484799 RBCK1Q9BYM8 510 aa7.84□□□□□ -1.15
SMC4-215ENST00000484799 DRD2P14416 443 aa7.83□□□□□ -1.16
SMC4-215ENST00000484799 PDE3AQ14432 1141 aa7.83□□□□□ -1.16
SMC4-215ENST00000484799 ZNF423Q2M1K9 1284 aa7.83□□□□□ -1.16
SMC4-215ENST00000484799 DTHD1Q6ZMT9 781 aa7.83□□□□□ -1.16
SMC4-215ENST00000484799 DYMQ7RTS9 669 aa7.83□□□□□ -1.16
SMC4-215ENST00000484799 FBXL6Q8N531 539 aa7.83□□□□□ -1.16
SMC4-215ENST00000484799 SUGCTQ9HAC7 445 aa7.83□□□□□ -1.16
SMC4-215ENST00000484799 WDR64B1ANS9 1081 aa7.82□□□□□ -1.16
SMC4-215ENST00000484799 PPP2R3AQ06190 1150 aa7.82□□□□□ -1.16
SMC4-215ENST00000484799 SOX4Q06945 474 aaPredicted RBP7.82□□□□□ -1.16
SMC4-215ENST00000484799 SGO2Q562F6 1265 aa7.82□□□□□ -1.16
SMC4-215ENST00000484799 AKAP4Q5JQC9 854 aa7.82□□□□□ -1.16
SMC4-215ENST00000484799 ZSCAN29Q8IWY8 852 aaPredicted RBP7.82□□□□□ -1.16
SMC4-215ENST00000484799 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
SMC4-215ENST00000484799 AP3B2Q13367 1082 aa7.81□□□□□ -1.16
SMC4-215ENST00000484799 SHKBP1Q8TBC3 707 aa7.81□□□□□ -1.16
SMC4-215ENST00000484799 MFSD14AQ96MC6 490 aa7.81□□□□□ -1.16
SMC4-215ENST00000484799 OSBPL1AQ9BXW6 950 aa7.81□□□□□ -1.16
SMC4-215ENST00000484799 GNEQ9Y223 722 aaKnown RBP7.81□□□□□ -1.16
SMC4-215ENST00000484799 GPR182O15218 404 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 TGFB1P01137 390 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 SLFN14P0C7P3 912 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 ZNF157P51786 506 aaPredicted RBP7.8□□□□□ -1.16
SMC4-215ENST00000484799 PTPN12Q05209 780 aaKnown RBP7.8□□□□□ -1.16
SMC4-215ENST00000484799 TMC7Q7Z402 723 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 EPS8L3Q8TE67 593 aaKnown RBP7.8□□□□□ -1.16
SMC4-215ENST00000484799 FBLIM1Q8WUP2 373 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 ALKBH8Q96BT7 664 aaKnown RBP7.8□□□□□ -1.16
SMC4-215ENST00000484799 ZNF576Q9H609 170 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 GPN3Q9UHW5 284 aaPredicted RBP7.8□□□□□ -1.16
SMC4-215ENST00000484799 AP4E1Q9UPM8 1137 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
SMC4-215ENST00000484799 B3GALT4O96024 378 aa7.79□□□□□ -1.16
SMC4-215ENST00000484799 ITPKAP23677 461 aa7.79□□□□□ -1.16
SMC4-215ENST00000484799 FCGRTP55899 365 aa7.79□□□□□ -1.16
SMC4-215ENST00000484799 MAP7Q14244 749 aa7.79□□□□□ -1.16
SMC4-215ENST00000484799 RPS26P11Q5JNZ5 115 aaPredicted RBP7.79□□□□□ -1.16
SMC4-215ENST00000484799 AKAP2Q9Y2D5 859 aa7.79□□□□□ -1.16
SMC4-215ENST00000484799 PATL2C9JE40 543 aaKnown RBP7.78□□□□□ -1.16
SMC4-215ENST00000484799 DLGAP3O95886 979 aa7.78□□□□□ -1.16
SMC4-215ENST00000484799 XRCC5P13010 732 aaKnown RBP7.78□□□□□ -1.16
SMC4-215ENST00000484799 RAB6AP20340 208 aa7.78□□□□□ -1.16
SMC4-215ENST00000484799 ASPAP45381 313 aa7.78□□□□□ -1.16
SMC4-215ENST00000484799 DUSP27Q5VZP5 1158 aa7.78□□□□□ -1.16
SMC4-215ENST00000484799 ZDHHC13Q8IUH4 622 aa7.78□□□□□ -1.16
SMC4-215ENST00000484799 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
SMC4-215ENST00000484799 TIAF1O95411 115 aa7.77□□□□□ -1.17
SMC4-215ENST00000484799 ADH5P11766 374 aa7.77□□□□□ -1.17
SMC4-215ENST00000484799 GRM2Q14416 872 aa7.77□□□□□ -1.17
SMC4-215ENST00000484799 METTL22Q9BUU2 404 aaPredicted RBP7.77□□□□□ -1.17
SMC4-215ENST00000484799 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
SMC4-215ENST00000484799 PNMA6FA0A0J9YX94 578 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 MAPK8P45983 427 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 ATP2B2Q01814 1243 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 KCNA1Q09470 495 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 CDPF1Q6NVV7 123 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 PRPF40BQ6NWY9 871 aaKnown RBP7.76□□□□□ -1.17
SMC4-215ENST00000484799 C2CD4AQ8NCU7 369 aaPredicted RBP7.76□□□□□ -1.17
SMC4-215ENST00000484799 BCO2Q9BYV7 579 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 PIDD1Q9HB75 910 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 TMEM39AQ9NV64 488 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 PIM2Q9P1W9 311 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 IVNS1ABPQ9Y6Y0 642 aa7.76□□□□□ -1.17
SMC4-215ENST00000484799 AOC2O75106 756 aa7.75□□□□□ -1.17
SMC4-215ENST00000484799 NFICP08651 508 aa7.75□□□□□ -1.17
SMC4-215ENST00000484799 CD97P48960 835 aa7.75□□□□□ -1.17
SMC4-215ENST00000484799 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMC4-215ENST00000484799 KCNB2Q92953 911 aa7.75□□□□□ -1.17
SMC4-215ENST00000484799 ABCB6Q9NP58 842 aa7.75□□□□□ -1.17
SMC4-215ENST00000484799 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.74□□□□□ -1.17
SMC4-215ENST00000484799 WNT11O96014 354 aa7.74□□□□□ -1.17
SMC4-215ENST00000484799 CYP27A1Q02318 531 aa7.74□□□□□ -1.17
SMC4-215ENST00000484799 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
SMC4-215ENST00000484799 ANGEL1Q9UNK9 670 aaKnown RBP7.74□□□□□ -1.17
SMC4-215ENST00000484799 SAMM50Q9Y512 469 aa7.74□□□□□ -1.17
SMC4-215ENST00000484799 ACTL7BQ9Y614 415 aa7.74□□□□□ -1.17
SMC4-215ENST00000484799 CYP26A1O43174 497 aa7.73□□□□□ -1.17
SMC4-215ENST00000484799 LIG1P18858 919 aa7.73□□□□□ -1.17
SMC4-215ENST00000484799 NXPE4Q6UWF7 544 aa7.73□□□□□ -1.17
SMC4-215ENST00000484799 EMILIN2Q9BXX0 1053 aa7.73□□□□□ -1.17
SMC4-215ENST00000484799 LGR6Q9HBX8 967 aa7.73□□□□□ -1.17
SMC4-215ENST00000484799 CBX8Q9HC52 389 aa7.73□□□□□ -1.17
SMC4-215ENST00000484799 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms