RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
DDX39B-221ENST00000484566 TM4SF4P48230 202 aa11.08□□□□□ -0.64
DDX39B-221ENST00000484566 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
DDX39B-221ENST00000484566 PLBD2Q8NHP8 589 aa11.08□□□□□ -0.64
DDX39B-221ENST00000484566 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
DDX39B-221ENST00000484566 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
DDX39B-221ENST00000484566 RIPK4P57078 832 aa11.07□□□□□ -0.64
DDX39B-221ENST00000484566 SNX27Q96L92 541 aa11.07□□□□□ -0.64
DDX39B-221ENST00000484566 ISCA1Q9BUE6 129 aa11.07□□□□□ -0.64
DDX39B-221ENST00000484566 CFHR5Q9BXR6 569 aa11.07□□□□□ -0.64
DDX39B-221ENST00000484566 CHPF2Q9P2E5 772 aa11.07□□□□□ -0.64
DDX39B-221ENST00000484566 VPS9D1Q9Y2B5 631 aa11.07□□□□□ -0.64
DDX39B-221ENST00000484566 CACNA1AO00555 2505 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 EYSQ5T1H1 3165 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 TTC28Q96AY4 2481 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 PRAMEF18Q5VWM3 479 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 SPNS2Q8IVW8 549 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 SCAF8Q9UPN6 1271 aaKnown RBP11.06□□□□□ -0.64
DDX39B-221ENST00000484566 TRIM17Q9Y577 477 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 PRUNE2Q8WUY3 3088 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 XDHP47989 1333 aa11.06□□□□□ -0.64
DDX39B-221ENST00000484566 A0A1W2PPC1 479 aa11.05□□□□□ -0.64
DDX39B-221ENST00000484566 CCDC152Q4G0S7 254 aa11.05□□□□□ -0.64
DDX39B-221ENST00000484566 PODNQ7Z5L7 613 aa11.05□□□□□ -0.64
DDX39B-221ENST00000484566 GMLQ99445 158 aa11.05□□□□□ -0.64
DDX39B-221ENST00000484566 MYO3BQ8WXR4 1341 aa11.05□□□□□ -0.64
DDX39B-221ENST00000484566 ATP2B4P23634 1241 aa11.04□□□□□ -0.64
DDX39B-221ENST00000484566 NBPF9Q3BBW0 867 aa11.04□□□□□ -0.64
DDX39B-221ENST00000484566 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
DDX39B-221ENST00000484566 APOBEC3FQ8IUX4 373 aaKnown RBP11.04□□□□□ -0.64
DDX39B-221ENST00000484566 DEFB123Q8N688 67 aa11.04□□□□□ -0.64
DDX39B-221ENST00000484566 ZBTB38Q8NAP3 1195 aaPredicted RBP11.04□□□□□ -0.64
DDX39B-221ENST00000484566 SEC31BQ9NQW1 1179 aa11.04□□□□□ -0.64
DDX39B-221ENST00000484566 DBF4Q9UBU7 674 aaPredicted RBP11.04□□□□□ -0.64
DDX39B-221ENST00000484566 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
DDX39B-221ENST00000484566 MANSC4A6NHS7 340 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-221ENST00000484566 WNT10BO00744 389 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 HOXB7P09629 217 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 PRSS12P56730 875 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 TRIM28Q13263 835 aaKnown RBP11.03□□□□□ -0.64
DDX39B-221ENST00000484566 PRKG1Q13976 671 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 SPRYD7Q5W111 196 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 ANKRD18AQ8IVF6 992 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 ERO1AQ96HE7 468 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 R3HDMLQ9H3Y0 253 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 HYPKQ9NX55 129 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 ANGEL1Q9UNK9 670 aaKnown RBP11.03□□□□□ -0.64
DDX39B-221ENST00000484566 COL1A1P02452 1464 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-221ENST00000484566 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
DDX39B-221ENST00000484566 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 MMP14P50281 582 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 INHBEP58166 350 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
DDX39B-221ENST00000484566 KRT24Q2M2I5 525 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 RIC3Q7Z5B4 369 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 ARMC5Q96C12 935 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 CCDC85AQ96PX6 553 aaPredicted RBP11.02□□□□□ -0.65
DDX39B-221ENST00000484566 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 MTMR10Q9NXD2 777 aa11.02□□□□□ -0.65
DDX39B-221ENST00000484566 LAS1LQ9Y4W2 734 aaKnown RBP11.02□□□□□ -0.65
DDX39B-221ENST00000484566 SPEF2Q9C093 1822 aa11.01□□□□□ -0.65
DDX39B-221ENST00000484566 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
DDX39B-221ENST00000484566 PDE8AO60658 829 aa11.01□□□□□ -0.65
DDX39B-221ENST00000484566 SASH1O94885 1247 aa11.01□□□□□ -0.65
DDX39B-221ENST00000484566 ZBTB48P10074 688 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-221ENST00000484566 TMPOP42166 694 aaKnown RBP11.01□□□□□ -0.65
DDX39B-221ENST00000484566 PROX2Q3B8N5 592 aa11.01□□□□□ -0.65
DDX39B-221ENST00000484566 CDC5LQ99459 802 aaKnown RBP11.01□□□□□ -0.65
DDX39B-221ENST00000484566 LAMB1P07942 1786 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 ZNF646O15015 1829 aaPredicted RBP11□□□□□ -0.65
DDX39B-221ENST00000484566 MYH3P11055 1940 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 CHL1O00533 1208 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
DDX39B-221ENST00000484566 DACT2Q5SW24 774 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 LDLRAD1Q5T700 205 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 STRIP1Q5VSL9 837 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 OTUD7BQ6GQQ9 843 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 Q7L0L9 218 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
DDX39B-221ENST00000484566 SLC10A4Q96EP9 437 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 PTPN22Q9Y2R2 807 aa11□□□□□ -0.65
DDX39B-221ENST00000484566 HRO43593 1189 aa10.99□□□□□ -0.65
DDX39B-221ENST00000484566 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
DDX39B-221ENST00000484566 PTGDRQ13258 359 aa10.99□□□□□ -0.65
DDX39B-221ENST00000484566 CCDC191Q8NCU4 936 aa10.99□□□□□ -0.65
DDX39B-221ENST00000484566 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
DDX39B-221ENST00000484566 DPF3Q92784 378 aa10.99□□□□□ -0.65
DDX39B-221ENST00000484566 MYD88Q99836 296 aa10.99□□□□□ -0.65
DDX39B-221ENST00000484566 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms