RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
SPTA1-206ENST00000484520 XKR5Q6UX68 686 aa6.66□□□□□ -1.34
SPTA1-206ENST00000484520 EDEM1Q92611 657 aa6.66□□□□□ -1.34
SPTA1-206ENST00000484520 CLP1Q92989 425 aaKnown RBP6.66□□□□□ -1.34
SPTA1-206ENST00000484520 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
SPTA1-206ENST00000484520 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
SPTA1-206ENST00000484520 AQRO60306 1485 aaKnown RBP eCLIP6.66□□□□□ -1.342e-11■■■□□ 15.5
SPTA1-206ENST00000484520 EIF4G3O43432 1585 aaKnown RBP6.65□□□□□ -1.34
SPTA1-206ENST00000484520 ATG7O95352 703 aa6.65□□□□□ -1.34
SPTA1-206ENST00000484520 RPLP1P05386 114 aaKnown RBP6.65□□□□□ -1.34
SPTA1-206ENST00000484520 DNM1Q05193 864 aaKnown RBP6.65□□□□□ -1.34
SPTA1-206ENST00000484520 CYB5RLQ6IPT4 315 aa6.65□□□□□ -1.34
SPTA1-206ENST00000484520 TMEM102Q8N9M5 508 aaPredicted RBP6.65□□□□□ -1.34
SPTA1-206ENST00000484520 SMG8Q8ND04 991 aaKnown RBP6.65□□□□□ -1.34
SPTA1-206ENST00000484520 USP26Q9BXU7 913 aa6.65□□□□□ -1.34
SPTA1-206ENST00000484520 TMPRSS13Q9BYE2 586 aa6.65□□□□□ -1.34
SPTA1-206ENST00000484520 GGNBP2Q9H3C7 697 aa6.65□□□□□ -1.34
SPTA1-206ENST00000484520 ZNF608Q9ULD9 1512 aaPredicted RBP6.65□□□□□ -1.35
SPTA1-206ENST00000484520 FAM95CA0A1B0GW59 222 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 TIAF1O95411 115 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 IKBKEQ14164 716 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 C8orf34Q49A92 452 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 BSNDQ8WZ55 320 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 NXPE3Q969Y0 559 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 OSMRQ99650 979 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 CHRDQ9H2X0 955 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 CYP4F12Q9HCS2 524 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 SLAIN2Q9P270 581 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 SNAPC4Q5SXM2 1469 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 PBRM1Q86U86 1689 aa6.64□□□□□ -1.35
SPTA1-206ENST00000484520 LOC100289279A0A1B0GTE1 492 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 DLGAP3O95886 979 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 DRD2P14416 443 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 USP11P51784 963 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 OGFOD2Q6N063 350 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 CDPF1Q6NVV7 123 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 PAOXQ6QHF9 649 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 NFXL1Q6ZNB6 911 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 VN1R5Q7Z5H4 357 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 VPS8Q8N3P4 1428 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 FBLIM1Q8WUP2 373 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 PMEPA1Q969W9 287 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 SUGCTQ9HAC7 445 aa6.63□□□□□ -1.35
SPTA1-206ENST00000484520 GRIN2AQ12879 1464 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 PDGFAP04085 211 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 PRNPP04156 253 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 PCSK2P16519 638 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 CPSF6Q16630 551 aaKnown RBP eCLIP6.62□□□□□ -1.35
SPTA1-206ENST00000484520 CBLL1Q75N03 491 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 TP53INP2Q8IXH6 220 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 TTC16Q8NEE8 873 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 ZKSCAN3Q9BRR0 538 aa6.62□□□□□ -1.35
SPTA1-206ENST00000484520 KIAA0586Q9BVV6 1533 aa6.61□□□□□ -1.35
SPTA1-206ENST00000484520 CYP26A1O43174 497 aa6.61□□□□□ -1.35
SPTA1-206ENST00000484520 ATP2B4P23634 1241 aa6.61□□□□□ -1.35
SPTA1-206ENST00000484520 ADMP35318 185 aa6.61□□□□□ -1.35
SPTA1-206ENST00000484520 NOM1Q5C9Z4 860 aaKnown RBP6.61□□□□□ -1.35
SPTA1-206ENST00000484520 EXOSC6Q5RKV6 272 aaKnown RBP6.61□□□□□ -1.35
SPTA1-206ENST00000484520 FBXL18Q96ME1 805 aa6.61□□□□□ -1.35
SPTA1-206ENST00000484520 TBC1D32Q96NH3 1257 aa6.61□□□□□ -1.35
SPTA1-206ENST00000484520 METTL22Q9BUU2 404 aaPredicted RBP6.61□□□□□ -1.35
SPTA1-206ENST00000484520 NUP160Q12769 1436 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 FMN1Q68DA7 1419 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 EREGO14944 169 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 JAG1P78504 1218 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 COL19A1Q14993 1142 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 HELQQ8TDG4 1101 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 ASAP3Q8TDY4 903 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 ASIC4Q96FT7 647 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 ARHGEF11O15085 1522 aa6.6□□□□□ -1.35
SPTA1-206ENST00000484520 ESRRAP11474 423 aaPredicted RBP6.59□□□□□ -1.35
SPTA1-206ENST00000484520 MZF1P28698 734 aaPredicted RBP6.59□□□□□ -1.35
SPTA1-206ENST00000484520 ZAR1Q86SH2 424 aa6.59□□□□□ -1.35
SPTA1-206ENST00000484520 C2CD4AQ8NCU7 369 aaPredicted RBP6.59□□□□□ -1.35
SPTA1-206ENST00000484520 SOX17Q9H6I2 414 aaPredicted RBP6.59□□□□□ -1.35
SPTA1-206ENST00000484520 IQGAP2Q13576 1575 aa6.59□□□□□ -1.35
SPTA1-206ENST00000484520 RIMBP3CA6NJZ7 1639 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 RIMBP3BA6NNM3 1639 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 RIMBP3Q9UFD9 1639 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 FAM170BA6NMN3 283 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 EDN3P14138 238 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 EIF1AXP47813 144 aaKnown RBP6.58□□□□□ -1.36
SPTA1-206ENST00000484520 GSTM4Q03013 218 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 SOX4Q06945 474 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-206ENST00000484520 BSDC1Q9NW68 430 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-206ENST00000484520 UGGT2Q9NYU1 1516 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 ARHGAP35Q9NRY4 1499 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 CTTNBP2Q8WZ74 1663 aa6.58□□□□□ -1.36
SPTA1-206ENST00000484520 MAP3K1Q13233 1512 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 PHACTR2O75167 634 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 C8AP07357 584 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 ITGB5P18084 799 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 MPSTP25325 297 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 FLCNQ8NFG4 579 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 EZH1Q92800 747 aaPredicted RBP6.57□□□□□ -1.36
SPTA1-206ENST00000484520 GATA6Q92908 595 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 YIPF2Q9BWQ6 316 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 BHLHE41Q9C0J9 482 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms