RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 CCL15-CCL14A0A0B4J2E2 113 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 SPDYE5A6NIY4 337 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 F6X3S4 739 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 TLR2O60603 784 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 VAMP4O75379 141 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 GYG1P46976 350 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 LACTBP83111 547 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 IFIT5Q13325 482 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 TAF1CQ15572 869 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 CCL15Q16663 113 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 CCDC27Q2M243 656 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 SLC9C1Q4G0N8 1177 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 MFSD14BQ5SR56 506 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 LMBR1LQ6UX01 489 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 STK31Q9BXU1 1019 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
RTFDC1-208ENST00000484084 TRIOBPQ9H2D6 2365 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 TCP10L2B9ZVM9 353 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 BTBD19C9JJ37 291 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 IRF6O14896 467 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 CRKP46108 304 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 GTF2A2P52657 109 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 CACNB3P54284 484 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 MOGSQ13724 837 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 MTFR1Q15390 333 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 C17orf99Q6UX52 265 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 PUS3Q9BZE2 481 aaKnown RBP11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 ZFYVE28Q9HCC9 887 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 CEP290O15078 2479 aa11.02□□□□□ -0.65
RTFDC1-208ENST00000484084 CACNA1FO60840 1977 aa11.01□□□□□ -0.65
RTFDC1-208ENST00000484084 RBM5P52756 815 aaKnown RBP eCLIP11.01□□□□□ -0.65
RTFDC1-208ENST00000484084 FKBP5Q13451 457 aaPredicted RBP11.01□□□□□ -0.65
RTFDC1-208ENST00000484084 ZKSCAN4Q969J2 545 aaPredicted RBP11.01□□□□□ -0.65
RTFDC1-208ENST00000484084 MYH16Q9H6N6 1097 aa11.01□□□□□ -0.65
RTFDC1-208ENST00000484084 RIPOR2Q9Y4F9 1068 aa11.01□□□□□ -0.65
RTFDC1-208ENST00000484084 PLIN1O60240 522 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 TNFAIP1Q13829 316 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 APOBEC3HQ6NTF7 200 aaKnown RBP11□□□□□ -0.65
RTFDC1-208ENST00000484084 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 LDHAL6AQ6ZMR3 332 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 NBPF11Q86T75 865 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 TRIM47Q96LD4 638 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
RTFDC1-208ENST00000484084 FANCIQ9NVI1 1328 aa11□□□□□ -0.65
RTFDC1-208ENST00000484084 HIBADHP31937 336 aaKnown RBP10.99□□□□□ -0.65
RTFDC1-208ENST00000484084 UBE4AQ14139 1066 aa10.99□□□□□ -0.65
RTFDC1-208ENST00000484084 SLC4A8Q2Y0W8 1093 aa10.99□□□□□ -0.65
RTFDC1-208ENST00000484084 ERO1BQ86YB8 467 aa10.99□□□□□ -0.65
RTFDC1-208ENST00000484084 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
RTFDC1-208ENST00000484084 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
RTFDC1-208ENST00000484084 IL16Q14005 1332 aa10.99□□□□□ -0.65
RTFDC1-208ENST00000484084 GRM8O00222 908 aa10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 CETPP11597 493 aa10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 HDLBPQ00341 1268 aaKnown RBP10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 PPIL2Q13356 520 aa10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 ZDHHC15Q96MV8 337 aa10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 SRRDQ9UH36 339 aa10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 CPA4Q9UI42 421 aa10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 IQSEC3Q9UPP2 1182 aaPredicted RBP10.98□□□□□ -0.65
RTFDC1-208ENST00000484084 SOX1O00570 391 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 GNRH1P01148 92 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 NBPF7P0C2Y1 421 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 OSBPP22059 807 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 INPP5BP32019 993 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 GJA8P48165 433 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 CCDC57Q2TAC2 916 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 FAM83AQ86UY5 434 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 SUCLG2Q96I99 432 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 WRNIP1Q96S55 665 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 MRIQ9BWK5 157 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 CNNM1Q9NRU3 951 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 ZNF112Q9UJU3 913 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 KCNH4Q9UQ05 1017 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 CHMP3Q9Y3E7 222 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 CSADQ9Y600 493 aa10.97□□□□□ -0.65
RTFDC1-208ENST00000484084 A0A0C4DFX4 3053 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 MGAMO43451 1857 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 RPAP1Q9BWH6 1393 aaPredicted RBP10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 UTYO14607 1347 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 PRMT2P55345 433 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 PPATQ06203 517 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 EXOSC9Q06265 439 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 SNAPC2Q13487 334 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 ARHGEF6Q15052 776 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 RABL6Q3YEC7 729 aaPredicted RBP10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 FKBP1CQ5VVH2 108 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 GPAT2Q6NUI2 795 aa10.96□□□□□ -0.65
RTFDC1-208ENST00000484084 MIGA2Q7L4E1 593 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms