RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 DNAJC5GQ8N7S2 189 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 KIAA1024Q9UPX6 916 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 BRCA1P38398 1863 aaKnown RBP8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 KDRP35968 1356 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 WASHC2AQ641Q2 1341 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 COL5A3P25940 1745 aaPredicted RBP8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 BACH1O14867 736 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 RFC4P35249 363 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 HTRA3P83110 453 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 C9orf131Q5VYM1 1079 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 NBPF10Q6P3W6 841 aaKnown RBP8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 VRTNQ9H8Y1 702 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 PARP3Q9Y6F1 533 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 PLEKHG2Q9H7P9 1386 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 KCPQ6ZWJ8 1503 aa8.26□□□□□ -1.09
SEMA3D-204ENST00000484038 ZNF831Q5JPB2 1677 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 CDC14CA4D256 554 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 H3BM21 787 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 GYS1P13807 737 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 TNNT2P45379 298 aaPredicted RBP8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 SMTNP53814 917 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 NPAS3Q8IXF0 933 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 GAS2L1Q99501 681 aaPredicted RBP8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 TIMMDC1Q9NPL8 285 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 ARFGEF1Q9Y6D6 1849 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 CNTNAP4Q9C0A0 1308 aa8.25□□□□□ -1.09
SEMA3D-204ENST00000484038 SLC35F4A4IF30 521 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 SLC4A9Q96Q91 983 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 KDM2BQ8NHM5 1336 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 EIF4A2Q14240 407 aaKnown RBP8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 COL13A1Q5TAT6 717 aaPredicted RBP8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 RHBDD1Q8TEB9 315 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 IRF7Q92985 503 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 KLRG1Q96E93 195 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 RNF181Q9P0P0 153 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 PIM2Q9P1W9 311 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 POLKQ9UBT6 870 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 SERPINA10Q9UK55 444 aa8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 TNRC6CQ9HCJ0 1690 aaKnown RBP8.24□□□□□ -1.09
SEMA3D-204ENST00000484038 KDM6AO15550 1401 aaPredicted RBP8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 A6NJY4 79 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 SPATA31C2B4DYI2 1134 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 ERVV-2B6SEH9 535 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L10C9JJH3 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L21D6R901 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 RPS6KA4O75676 772 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 KCNA3P22001 575 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 ITGA6P23229 1130 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 CABP4P57796 275 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 FSTL1Q12841 308 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 DALRD3Q5D0E6 543 aaKnown RBP8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 ZNF530Q6P9A1 599 aaPredicted RBP8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 SRP68Q9UHB9 627 aaKnown RBP8.23□□□□□ -1.09
SEMA3D-204ENST00000484038 SFI1A8K8P3 1242 aa8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 CHRNA5P30532 468 aa8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 CRKLP46109 303 aaKnown RBP8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 C4orf17Q53FE4 359 aa8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 SIX5Q8N196 739 aa8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 RRAGCQ9HB90 399 aa8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 TIMELESSQ9UNS1 1208 aa8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 PCNTO95613 3336 aa8.22□□□□□ -1.09
SEMA3D-204ENST00000484038 MYH14Q7Z406 1995 aaKnown RBP8.21□□□□□ -1.09
SEMA3D-204ENST00000484038 USP42Q9H9J4 1324 aaKnown RBP8.21□□□□□ -1.09
SEMA3D-204ENST00000484038 TJP1Q07157 1748 aa8.21□□□□□ -1.09
SEMA3D-204ENST00000484038 DDR1Q08345 913 aa8.21□□□□□ -1.1
SEMA3D-204ENST00000484038 PLEKHO1Q53GL0 409 aaPredicted RBP8.21□□□□□ -1.1
SEMA3D-204ENST00000484038 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
SEMA3D-204ENST00000484038 CCDC82Q8N4S0 544 aa8.21□□□□□ -1.1
SEMA3D-204ENST00000484038 NIFKQ9BYG3 293 aaKnown RBP8.21□□□□□ -1.1
SEMA3D-204ENST00000484038 GPAMQ9HCL2 828 aa8.21□□□□□ -1.1
SEMA3D-204ENST00000484038 MTHFSP49914 203 aa8.2□□□□□ -1.1
SEMA3D-204ENST00000484038 RASSF7Q02833 373 aa8.2□□□□□ -1.1
SEMA3D-204ENST00000484038 C1orf141Q5JVX7 400 aa8.2□□□□□ -1.1
SEMA3D-204ENST00000484038 JMYQ8N9B5 988 aa8.2□□□□□ -1.1
SEMA3D-204ENST00000484038 SMC1BQ8NDV3 1235 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms