RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 EDEM1Q92611 657 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 RUSC1Q9BVN2 902 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 TANGO6Q9C0B7 1094 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 HIF3AQ9Y2N7 669 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-214ENST00000483925 BTBD11A6QL63 1104 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 ACPPP15309 386 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 TAL1P17542 331 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-214ENST00000483925 PREPP48147 710 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 ZNF211Q13398 564 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-214ENST00000483925 C8orf34Q49A92 452 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 FDX2Q6P4F2 183 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 GIMAP6Q6P9H5 292 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 DTX1Q86Y01 620 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 SHKBP1Q8TBC3 707 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 HELQQ8TDG4 1101 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 FMNL2Q96PY5 1086 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 GGNBP2Q9H3C7 697 aa6.42□□□□□ -1.38
PTCD3-214ENST00000483925 TMA7Q9Y2S6 64 aaKnown RBP6.42□□□□□ -1.38
PTCD3-214ENST00000483925 MEGF11A6BM72 1044 aa6.41□□□□□ -1.38
PTCD3-214ENST00000483925 ADAMTS4O75173 837 aa6.41□□□□□ -1.38
PTCD3-214ENST00000483925 TRPA1O75762 1119 aa6.41□□□□□ -1.38
PTCD3-214ENST00000483925 WNT11O96014 354 aa6.41□□□□□ -1.38
PTCD3-214ENST00000483925 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
PTCD3-214ENST00000483925 FKBP4Q02790 459 aaKnown RBP eCLIP6.41□□□□□ -1.38
PTCD3-214ENST00000483925 C19orf57Q0VDD7 668 aa6.41□□□□□ -1.38
PTCD3-214ENST00000483925 MRPL58Q14197 206 aaKnown RBP6.41□□□□□ -1.38
PTCD3-214ENST00000483925 SOX13Q9UN79 622 aa6.41□□□□□ -1.38
PTCD3-214ENST00000483925 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.38
PTCD3-214ENST00000483925 PDGFAP04085 211 aa6.4□□□□□ -1.38
PTCD3-214ENST00000483925 MZF1P28698 734 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-214ENST00000483925 TMEM102Q8N9M5 508 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-214ENST00000483925 HHIPQ96QV1 700 aa6.4□□□□□ -1.38
PTCD3-214ENST00000483925 ANO2Q9NQ90 1003 aa6.4□□□□□ -1.38
PTCD3-214ENST00000483925 A6NHS1 94 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 WDR64B1ANS9 1081 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 NUTM2GQ5VZR2 741 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 SLC43A3Q8NBI5 491 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 GIMAP7Q8NHV1 300 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 GTF3C2Q8WUA4 911 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-214ENST00000483925 BSNDQ8WZ55 320 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 NXPE3Q969Y0 559 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 ARMC5Q96C12 935 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 OSMRQ99650 979 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 CHRDQ9H2X0 955 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 NLRP2Q9NX02 1062 aa6.39□□□□□ -1.39
PTCD3-214ENST00000483925 ARID4BQ4LE39 1312 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-214ENST00000483925 SOX1O00570 391 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-214ENST00000483925 ATP2B1P20020 1258 aa6.38□□□□□ -1.39
PTCD3-214ENST00000483925 MAP4P27816 1152 aaKnown RBP6.38□□□□□ -1.39
PTCD3-214ENST00000483925 EIF1AXP47813 144 aaKnown RBP6.38□□□□□ -1.39
PTCD3-214ENST00000483925 IKBKEQ14164 716 aa6.38□□□□□ -1.39
PTCD3-214ENST00000483925 HGSNATQ68CP4 663 aa6.38□□□□□ -1.39
PTCD3-214ENST00000483925 ALKBH2Q6NS38 261 aa6.38□□□□□ -1.39
PTCD3-214ENST00000483925 C12orf50Q8NA57 414 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-214ENST00000483925 TMEM87AQ8NBN3 555 aa6.38□□□□□ -1.39
PTCD3-214ENST00000483925 MFSD14AQ96MC6 490 aa6.38□□□□□ -1.39
PTCD3-214ENST00000483925 CYP4F12Q9HCS2 524 aa6.38□□□□□ -1.39
PTCD3-214ENST00000483925 TLDC2A0PJX2 215 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 EDN3P14138 238 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 MPSTP25325 297 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 RXRBP28702 533 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 ARHGAP4P98171 946 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 XPCQ01831 940 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-214ENST00000483925 GNL2Q13823 731 aaKnown RBP6.37□□□□□ -1.39
PTCD3-214ENST00000483925 C9orf131Q5VYM1 1079 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 SMG8Q8ND04 991 aaKnown RBP6.37□□□□□ -1.39
PTCD3-214ENST00000483925 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 TMPRSS13Q9BYE2 586 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 LNPKQ9C0E8 428 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 TGIF2Q9GZN2 237 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 METTL5Q9NRN9 209 aaKnown RBP6.37□□□□□ -1.39
PTCD3-214ENST00000483925 ATG3Q9NT62 314 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 PIM2Q9P1W9 311 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 PRKAG2Q9UGJ0 569 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 BRPF3Q9ULD4 1205 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 RNF114Q9Y508 228 aa6.37□□□□□ -1.39
PTCD3-214ENST00000483925 EREGO14944 169 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 ECM1Q16610 540 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 SGO2Q562F6 1265 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 VN1R5Q7Z5H4 357 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 NT5DC4Q86YG4 428 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 DNAJC2Q99543 621 aaKnown RBP6.36□□□□□ -1.39
PTCD3-214ENST00000483925 USP26Q9BXU7 913 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 SUGCTQ9HAC7 445 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 MRS2Q9HD23 443 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
PTCD3-214ENST00000483925 PHACTR2O75167 634 aa6.35□□□□□ -1.39
PTCD3-214ENST00000483925 TNFRSF21O75509 655 aa6.35□□□□□ -1.39
PTCD3-214ENST00000483925 FAM13AO94988 1023 aa6.35□□□□□ -1.39
PTCD3-214ENST00000483925 YBX3P16989 372 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTCD3-214ENST00000483925 HOXA10P31260 410 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-214ENST00000483925 RAD51AP2Q09MP3 1159 aa6.35□□□□□ -1.39
PTCD3-214ENST00000483925 AAMPQ13685 434 aa6.35□□□□□ -1.39
PTCD3-214ENST00000483925 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
PTCD3-214ENST00000483925 SOGA3Q5TF21 947 aa6.35□□□□□ -1.39
PTCD3-214ENST00000483925 RNF34Q969K3 372 aa6.35□□□□□ -1.39
PTCD3-214ENST00000483925 RBCK1Q9BYM8 510 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms